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Aliases for LINC00868 Gene
Subcategory (RNA class) for LINC00868 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC00868 Gene
External Ids for LINC00868 Gene
- HGNC: 27562
- Entrez Gene: 283994
- Ensembl: ENSG00000267535
Previous HGNC Symbols for LINC00868 Gene
- C17orf52
Previous GeneCards Identifiers for LINC00868 Gene
- GC17P074848
Summaries for LINC00868 Gene
GeneCards Summary for LINC00868 Gene
LINC00868 (Long Intergenic Non-Protein Coding RNA 868) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC00868 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00868 Gene
Genomics for LINC00868 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC00868 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J076850 | Enhancer | 0.4 | Ensembl | 606.9 | +0.9 | 935 | 0.6 | SOX13 ZBTB33 NRF1 | LINC00868 MGAT5B SRSF2 | |
| GH17J076845 | Enhancer | 1 | Ensembl ENCODE | 7.5 | -4.5 | -4504 | 2 | RFX1 LEF1 IKZF1 JUND ZNF24 DPF2 ZNF600 SOX6 EP300 MNT | MGAT5B LINC00868 MFSD11 MXRA7 ENSG00000287836 SRSF2 | |
| GH17J077617 | Enhancer | 0.5 | Ensembl | 5.2 | +768.6 | 768635 | 1.2 | ZFHX2 GATA3 CTCF EGR2 GATA2 | LINC00868 piR-50444-189 5MWI_A-079 ENSG00000285535 SEPTIN9 TNRC6C | |
| GH17J076826 | Enhancer | 0.3 | Ensembl | 5.3 | -22.9 | -22865 | 1 | REST | MXRA7 RNU6-97P LINC00868 LOC107985089 lnc-MGAT5B-1 MGAT5B SRSF2 | |
| GH17J076853 | Enhancer | 0.8 | Ensembl | 0.7 | +4.3 | 4335 | 0.2 | PRDM10 ZNF629 PATZ1 ZNF501 ZNF600 SCRT2 ZNF639 TSHZ1 OSR2 BCL11A | LINC00868 MGAT5B SRSF2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC00868 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC00868 Gene
Genomic Locations for LINC00868 Gene
- chr17:76,849,566-76,861,836
- (GRCh38/hg38)
- Size:
- 12,271 bases
- Orientation:
- Plus strand
- chr17:74,846,258-74,857,918
- (GRCh37/hg19)
- Size:
- 11,661 bases
- Orientation:
- Plus strand
Genomic View for LINC00868 Gene
Genes around LINC00868 on UCSC Golden Path with GeneCards custom track
LINC00868 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 17q25.2 by HGNC
- 17q25.2 by Entrez Gene
- 17q25.2 by Ensembl
LINC00868 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC00868 Gene
Proteins for LINC00868 Gene
Post-translational modifications for LINC00868 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00868
- Origene Custom Protein Services for LINC00868
No data available for DME Specific Peptides for LINC00868 Gene
Domains & Families for LINC00868 Gene
Gene Families for LINC00868 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00868 Gene
Function for LINC00868 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for LINC00868 - Select products 50% OFF >
- * LINC00868 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for LINC00868
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LINC00868
- Browse OriGene Inhibitory RNA Products For LINC00868
Clone Products
- Applied Biological Materials (abm): Clones for LINC00868 - Select products 50% OFF >
- * LINC00868 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00868 Gene
Localization for LINC00868 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00868 Gene
Transcripts for LINC00868 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00868 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000407C1B_9606 | lncRNA | 547 | 4 |
Ensembl: ENST00000589708 (view in UCSC) , LncBook: HSALNT0245520, LNCipedia: LINC00868:4, NONCODE: NONHSAT056094.2, |
| URS0000A76558_9606 | lncRNA | 549 | 3 |
HGNC: 27562, RefSeq: NR_135283, LNCipedia: LINC00868:6, |
| URS00002AE404_9606 | lncRNA | 457 | 3 |
Ensembl: ENST00000589914 (view in UCSC) , LNCipedia: LINC00868:5, NONCODE: NONHSAT056095.2, |
| URS000028677C_9606 | lncRNA | 853 | 2 |
Ensembl: ENST00000592919 (view in UCSC) , LNCipedia: LINC00868:3, |
| URS0000A76DAA_9606 | lncRNA | 460 | 2 |
RefSeq: NR_135284, LNCipedia: LINC00868:7, |
LINC00868 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC00868 Gene
- 3 NCBI additional mRNA sequence :
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for LINC00868 - Select products 50% OFF >
- * LINC00868 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for LINC00868
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LINC00868
- Browse OriGene Inhibitory RNA Products For LINC00868
Clone Products
- Applied Biological Materials (abm): Clones for LINC00868 - Select products 50% OFF >
- * LINC00868 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for LINC00868 Gene
- GeneLoc Exon Structure for
- LINC00868
Expression for LINC00868 Gene
mRNA differential expression in normal tissues according to GTEx for LINC00868 Gene
This gene is overexpressed in Testis (x32.7) and Skin - Not Sun Exposed (Suprapubic) (x5.8).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC00868
SOURCE GeneReport for Unigene cluster for LINC00868 Gene:
Hs.645372Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00868 Gene
Orthologs for LINC00868 Gene
No data available for Orthologs for LINC00868 Gene
Paralogs for LINC00868 Gene
No data available for Paralogs for LINC00868 Gene
Variants for LINC00868 Gene
Additional Variant Information for LINC00868 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC00868
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC00868 Gene
Disorders for LINC00868 Gene
Additional Disease Information for LINC00868
No disorders were found for LINC00868 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00868 Gene
Publications for LINC00868 Gene
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3
- Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3
Products for LINC00868 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00868
- Origene Custom Protein Services for LINC00868
- Origene shrna and RNAi products in human, mouse, rat for LINC00868
- Browse OriGene Inhibitory RNA Products For LINC00868
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC00868
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC00868
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Search results for available LOC283994 related products ranked by validation data
- antibodies-online: Search results for available LOC283994 related products ranked by validation data
- antibodies-online: Search results for available LOC283994 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC00868
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC00868
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC00868
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC00868
Sources for LINC00868 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB