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Aliases for LINC00668 Gene
Subcategory (RNA class) for LINC00668 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC00668 Gene
External Ids for LINC00668 Gene
- HGNC: 44328
- Entrez Gene: 400643
- Ensembl: ENSG00000265933
Previous GeneCards Identifiers for LINC00668 Gene
- GC18M006947
Summaries for LINC00668 Gene
GeneCards Summary for LINC00668 Gene
LINC00668 (Long Intergenic Non-Protein Coding RNA 668) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC00668 include Oral Squamous Cell Carcinoma and Gastric Cancer.
Additional gene information for LINC00668 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00668 Gene
Genomics for LINC00668 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC00668 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC00668 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC00668 Gene
Genomic Locations for LINC00668 Gene
- chr18:6,919,496-6,929,996
- (GRCh38/hg38)
- Size:
- 10,501 bases
- Orientation:
- Minus strand
- chr18:6,919,495-6,929,965
- (GRCh37/hg19)
- Size:
- 10,471 bases
- Orientation:
- Minus strand
Genomic View for LINC00668 Gene
Genes around LINC00668 on UCSC Golden Path with GeneCards custom track
LINC00668 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 18p11.31 by HGNC
- 18p11.31 by Entrez Gene
- 18p11.31 by Ensembl
LINC00668 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC00668 Gene
Proteins for LINC00668 Gene
Post-translational modifications for LINC00668 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00668
- Origene Custom Protein Services for LINC00668
No data available for DME Specific Peptides for LINC00668 Gene
Domains & Families for LINC00668 Gene
Gene Families for LINC00668 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00668 Gene
Function for LINC00668 Gene
Phenotypes for LINC00668 Gene
- GenomeRNAi human phenotypes for LINC00668:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for LINC00668
- Browse OriGene Inhibitory RNA Products For LINC00668
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00668 Gene
Localization for LINC00668 Gene
| Compartment | Confidence |
|---|---|
| extracellular | 1 |
| cytoskeleton | 1 |
| nucleus | 1 |
| cytosol | 1 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00668 Gene
Transcripts for LINC00668 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00668 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000075E986_9606 | lncRNA | 1751 | 5 |
HGNC: 44328, RefSeq: NR_034100, LncBook: HSALNT0247515, LNCipedia: LINC00668:7, NONCODE: NONHSAT057125.2, |
| URS000046DA63_9606 | lncRNA | 1902 | 4 |
Ensembl: ENST00000581725 (view in UCSC) , LncBook: HSALNT0247502, LNCipedia: LINC00668:9, NONCODE: NONHSAT057124.2, |
| URS000007CA50_9606 | lncRNA | 695 | 4 |
Ensembl: ENST00000578278 (view in UCSC) , LncBook: HSALNT0247516, LNCipedia: LINC00668:14, NONCODE: NONHSAT057126.2, |
| URS00004B17DF_9606 | lncRNA | 605 | 4 |
Ensembl: ENST00000579012 (view in UCSC) , LncBook: HSALNT0247532, LNCipedia: LINC00668:1, NONCODE: NONHSAT057143.2, |
| URS0000161674_9606 | lncRNA | 582 | 4 |
Ensembl: ENST00000583316 (view in UCSC) , LncBook: HSALNT0247528, LNCipedia: LINC00668:10, NONCODE: NONHSAT057134.2, |
LINC00668 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC00668 Gene
- 1 REFSEQ mRNAs :
- 3 NCBI additional mRNA sequence :
miRNA Products
Inhibitory RNA Products
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- Browse OriGene Inhibitory RNA Products For LINC00668
Clone Products
Relevant External Links for LINC00668 Gene
- GeneLoc Exon Structure for
- LINC00668
Expression for LINC00668 Gene
mRNA differential expression in normal tissues according to GTEx for LINC00668 Gene
This gene is overexpressed in Testis (x19.7), Colon - Transverse (x19.3), Prostate (x5.0), and Pancreas (x4.1).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC00668
SOURCE GeneReport for Unigene cluster for LINC00668 Gene:
Hs.253920Primer Products
-
OriGene qPCR primer pairs for LINC00668
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00668 Gene
Orthologs for LINC00668 Gene
No data available for Orthologs for LINC00668 Gene
Paralogs for LINC00668 Gene
No data available for Paralogs for LINC00668 Gene
Variants for LINC00668 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2758711 | CNV | gain | 17122850 |
| esv3584943 | CNV | gain | 24956385 |
| esv3641676 | CNV | loss | 21293372 |
| nsv1064175 | CNV | gain | 25217958 |
| nsv576397 | CNV | gain | 21841781 |
| nsv7302 | OTHER | inversion | 18451855 |
| nsv833583 | CNV | gain | 17160897 |
Additional Variant Information for LINC00668 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC00668
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC00668 Gene
Disorders for LINC00668 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| oral squamous cell carcinoma |
|
|
| gastric cancer |
|
Search LINC00668 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for LINC00668
No data available for UniProtKB/Swiss-Prot and Genatlas for LINC00668 Gene
Publications for LINC00668 Gene
- STAT3-induced long noncoding RNA LINC00668 promotes migration and invasion of non-small cell lung cancer via the miR-193a/KLF7 axis. (PMID: 31150989) An YX … Zhang XJ (Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2019) 2 3
- Long intergenic non-coding RNA 668 regulates VEGFA signaling through inhibition of miR-297 in oral squamous cell carcinoma. (PMID: 28564590) Zhang CZ (Biochemical and biophysical research communications 2017) 2 3
- LINC00668 promotes tumorigenesis and progression through sponging miR-188-5p and regulating USP47 in colorectal cancer. (PMID: 31233752) Yan S … Zeng L (European journal of pharmacology 2019) 3
- Genome‑wide investigation of the clinical implications and molecular mechanism of long noncoding RNA LINC00668 and protein‑coding genes in hepatocellular carcinoma. (PMID: 31432149) Wang X … Peng T (International journal of oncology 2019) 3
- Expression profile analysis identifies the long non-coding RNA landscape and the potential carcinogenic functions of LINC00668 in laryngeal squamous cell carcinoma. (PMID: 30415008) Zhao L … Wang B (Gene 2019) 3
Products for LINC00668 Gene
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- Custom Assay Services
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- Browse OriGene Inhibitory RNA Products For LINC00668
- OriGene qPCR primer pairs for LINC00668
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- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC00668
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
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- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- VectorBuilder Custom and pre-made DNA vectors for LINC00668 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for LINC00668 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for LINC00668 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for LINC00668 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for LINC00668
- antibodies-online: Search results for available LOC400643 related products ranked by validation data
- antibodies-online: Search results for available LOC400643 related products ranked by validation data
- antibodies-online: Search results for available LOC400643 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC00668
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Sources for LINC00668 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB