Aliases for LINC00618 Gene

Data sources for LINC00618 Gene:

Subcategory (RNA class) for LINC00618 Gene

lncRNA

Aliases for LINC00618 Gene

External Ids for LINC00618 Gene

Previous HGNC Symbols for LINC00618 Gene

  • C14orf63

Previous GeneCards Identifiers for LINC00618 Gene

  • GC14P097411

Summaries for LINC00618 Gene

GeneCards Summary for LINC00618 Gene

LINC00618 (Long Intergenic Non-Protein Coding RNA 618) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC00618 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00618 Gene

Genomics for LINC00618 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC00618 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J096945 Enhancer 0.3 Ensembl 0.4 +14.5 14534 0.2 ZMYM3 LINC00618 NONHSAG015837.2 HSALNG0103535 ENSG00000288034 VRK1
GH14J096953 Enhancer 0.2 Ensembl 0.3 +22.3 22334 0.2 VRK1 HSALNG0103535 NONHSAG015837.2 LINC00618 ENSG00000288034
GH14J096948 Enhancer 0.2 Ensembl 0.4 +18.5 18534 2.6 VRK1 HSALNG0103535 NONHSAG015837.2 LINC00618 ENSG00000288034
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC00618 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC00618 Gene

Latest Assembly
chr14:96,931,367-96,945,394
(GRCh38/hg38)
Size:
14,028 bases
Orientation:
Plus strand

Previous Assembly
chr14:97,409,916-97,411,731
(GRCh37/hg19 by Entrez Gene)
Size:
1,816 bases
Orientation:
Plus strand

Genomic View for LINC00618 Gene

Genes around LINC00618 on UCSC Golden Path with GeneCards custom track
LINC00618 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC00618 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00618 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00618 Gene

Proteins for LINC00618 Gene

Post-translational modifications for LINC00618 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00618 Gene

Domains & Families for LINC00618 Gene

Gene Families for LINC00618 Gene

genes like me logo Genes that share domains with LINC00618: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00618 Gene

Function for LINC00618 Gene

Phenotypes From GWAS Catalog for LINC00618 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00618 Gene

Localization for LINC00618 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00618 Gene

Pathways & Interactions for LINC00618 Gene

PathCards logo

SuperPathways for LINC00618 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC00618 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC00618 Gene

Drugs & Compounds for LINC00618 Gene

No Compound Related Data Available

Transcripts for LINC00618 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00618 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075C7BF_9606 lncRNA 361 2

RefSeq: NR_104113,

LNCipedia: LINC00618:3,

URS00000D5637_9606 lncRNA 448 3

LncBook: HSALNT0215387,

LNCipedia: LINC00618:2,

NONCODE: NONHSAT039556.2,

URS000016301D_9606 lncRNA 301 3

LncBook: HSALNT0215388,

LNCipedia: LINC00618:4,

NONCODE: NONHSAT039557.2,

URS0000A871C5_9606 lncRNA 700 1

LncBook: HSALNT0215384,

URS0001BCD76E_9606 lncRNA 700 1

LncBook: HSALNT0215384,

LINC00618 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC00618 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00618 Gene

No ASD Table

Relevant External Links for LINC00618 Gene

GeneLoc Exon Structure for
LINC00618

Expression for LINC00618 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC00618 Gene

genes like me logo Genes that share expression patterns with LINC00618: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00618 Gene

Orthologs for LINC00618 Gene

No data available for Orthologs and Evolution for LINC00618 Gene

Paralogs for LINC00618 Gene

No data available for Paralogs for LINC00618 Gene

Variants for LINC00618 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC00618 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC00618 Gene

Variant ID Type Subtype PubMed ID
nsv832867 CNV gain 17160897

Additional Variant Information for LINC00618 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC00618

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC00618 Gene

Disorders for LINC00618 Gene

Additional Disease Information for LINC00618

No disorders were found for LINC00618 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00618 Gene

Publications for LINC00618 Gene

  1. Generation and analysis of 280,000 human expressed sequence tags. (PMID: 8889549) Hillier LD … Marra M (Genome research 1996) 3

Products for LINC00618 Gene

Sources for LINC00618 Gene