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Aliases for LINC00588 Gene

Subcategory (RNA class) for LINC00588 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC00588 Gene

  • Long Intergenic Non-Protein Coding RNA 588 2 3 5
  • C8orf71 3 4
  • Chromosome 8 Open Reading Frame 71 2

External Ids for LINC00588 Gene

Previous HGNC Symbols for LINC00588 Gene

  • C8orf71

Previous GeneCards Identifiers for LINC00588 Gene

  • GC08P058193

Summaries for LINC00588 Gene

GeneCards Summary for LINC00588 Gene

LINC00588 (Long Intergenic Non-Protein Coding RNA 588) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC00588 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00588 Gene

Genomics for LINC00588 Gene

GeneHancer (GH) Regulatory Elements for LINC00588 Gene

Promoters and enhancers for LINC00588 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I057277 Enhancer 0.2 FANTOM5 0.8 -2.0 -2029 0.2 ENSG00000251142 LINC00588 LOC286177
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC00588 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC00588 Gene

Genomic Locations for LINC00588 Gene
5,189 bases
Plus strand

Genomic View for LINC00588 Gene

Genes around LINC00588 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00588 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00588 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00588 Gene

Proteins for LINC00588 Gene

  • Protein details for LINC00588 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein encoded by LINC00588
    Protein Accession:

    Protein attributes for LINC00588 Gene

    146 amino acids
    Molecular mass:
    16018 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00588 Gene

Post-translational modifications for LINC00588 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00588 Gene

Domains & Families for LINC00588 Gene

Protein Domains for LINC00588 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00588: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00588 Gene

Function for LINC00588 Gene

Phenotypes From GWAS Catalog for LINC00588 Gene

Gene Ontology (GO) - Molecular Function for LINC00588 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with LINC00588: view

Phenotypes for LINC00588 Gene

GenomeRNAi human phenotypes for LINC00588:
genes like me logo Genes that share phenotypes with LINC00588: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00588 Gene

Localization for LINC00588 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00588 Gene

Pathways & Interactions for LINC00588 Gene

SuperPathways for LINC00588 Gene

No Data Available

Interacting Proteins for LINC00588 Gene

Selected Interacting proteins: Q9Y4M8-CH071_HUMAN for LINC00588 Gene via IID UniProtKB

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for LINC00588 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC00588 Gene

Drugs & Compounds for LINC00588 Gene

No Compound Related Data Available

Transcripts for LINC00588 Gene

mRNA/cDNA for LINC00588 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00588 Gene

Long intergenic non-protein coding RNA 588:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00588 Gene

No ASD Table

Relevant External Links for LINC00588 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC00588 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC00588 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00588 Gene

This gene is overexpressed in Testis (x40.0).

NURSA nuclear receptor signaling pathways regulating expression of LINC00588 Gene:


SOURCE GeneReport for Unigene cluster for LINC00588 Gene:

genes like me logo Genes that share expression patterns with LINC00588: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00588 Gene

Orthologs for LINC00588 Gene

Evolution for LINC00588 Gene

Gene Tree for LINC00588 (if available)
Gene Tree for LINC00588 (if available)

No data available for Orthologs for LINC00588 Gene

Paralogs for LINC00588 Gene

No data available for Paralogs for LINC00588 Gene

Variants for LINC00588 Gene

Sequence variations from dbSNP and Humsavar for LINC00588 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000298609 -- 57,279,019(+) C/T upstream_transcript_variant
rs1000416465 -- 57,277,716(+) G/A upstream_transcript_variant
rs1000730319 -- 57,284,137(+) C/T intron_variant
rs1000740186 -- 57,283,904(+) C/T intron_variant
rs1001260964 -- 57,281,396(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC00588 Gene

Variant ID Type Subtype PubMed ID
nsv951436 CNV duplication 24416366
nsv951435 CNV deletion 24416366
nsv8354 CNV gain 18304495
nsv831321 CNV gain+loss 17160897
nsv824651 CNV gain 20364138
nsv428200 CNV gain 18775914
nsv1023586 CNV loss 25217958
esv2759618 CNV gain+loss 17122850
esv25719 CNV gain+loss 19812545

Additional Variant Information for LINC00588 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC00588 Gene

Disorders for LINC00588 Gene

Additional Disease Information for LINC00588

No disorders were found for LINC00588 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00588 Gene

Publications for LINC00588 Gene

  1. Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PMID: 11230166) Wiemann S … Poustka A (Genome research 2001) 2 3 4 58
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 58
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C … Lander ES (Nature 2006) 4 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LINC00588 Gene

Sources for LINC00588 Gene

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