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Aliases for LINC00515 Gene
Subcategory (RNA class) for LINC00515 Gene
lncRNA
Number of RNA Genes sources:
2 / 17
Aliases for LINC00515 Gene
External Ids for LINC00515 Gene
- HGNC: 16019
- Entrez Gene: 282566
- Ensembl: ENSG00000260583
Previous HGNC Symbols for LINC00515 Gene
- C21orf71
Previous GeneCards Identifiers for LINC00515 Gene
- GC21M026958
Summaries for LINC00515 Gene
GeneCards Summary for LINC00515 Gene
LINC00515 (Long Intergenic Non-Protein Coding RNA 515) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC00515 include Ovarian Cancer.
Additional gene information for LINC00515 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00515 Gene
Genomics for LINC00515 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC00515 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC00515 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC00515 Gene
Genomic Locations for LINC00515 Gene
- chr21:25,582,770-25,583,326
- (GRCh38/hg38)
- Size:
- 557 bases
- Orientation:
- Minus strand
- chr21:26,955,082-26,955,638
- (GRCh37/hg19)
- Size:
- 557 bases
- Orientation:
- Minus strand
Genomic View for LINC00515 Gene
Genes around LINC00515 on UCSC Golden Path with GeneCards custom track
LINC00515 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 21q21.3 by HGNC
- 21q21.3 by Entrez Gene
- 21q21.3 by Ensembl
LINC00515 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC00515 Gene
Proteins for LINC00515 Gene
Post-translational modifications for LINC00515 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00515
- Origene Custom Protein Services for LINC00515
No data available for DME Specific Peptides for LINC00515 Gene
Domains & Families for LINC00515 Gene
Gene Families for LINC00515 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00515 Gene
Function for LINC00515 Gene
Phenotypes From GWAS Catalog for LINC00515 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for LINC00515 - Select products 50% OFF >
- * LINC00515 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for LINC00515
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for LINC00515 - Select products 50% OFF >
- * LINC00515 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00515 Gene
Localization for LINC00515 Gene
| Compartment | Confidence |
|---|---|
| extracellular | 1 |
| nucleus | 1 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00515 Gene
Transcripts for LINC00515 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00515 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00005939EE_9606 | lncRNA | 557 | 3 |
Ensembl: ENST00000567517 (view in UCSC) , LNCipedia: lnc-MRPL39-1:1, NONCODE: NONHSAT081504.2, |
| URS0000CCE13C_9606 | lncRNA | 450 | 2 |
HGNC: 16019, RefSeq: NR_024092, |
| URS00008BE16D_9606 | lncRNA | 450 | 1 |
LNCipedia: lnc-MRPL39-1:2, |
LINC00515 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC00515 Gene
- 1 NCBI additional mRNA sequence :
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for LINC00515 - Select products 50% OFF >
- * LINC00515 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for LINC00515
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for LINC00515 - Select products 50% OFF >
- * LINC00515 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for LINC00515 Gene
- GeneLoc Exon Structure for
- LINC00515
Expression for LINC00515 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC00515
SOURCE GeneReport for Unigene cluster for LINC00515 Gene:
Hs.384586Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00515 Gene
Orthologs for LINC00515 Gene
No data available for Orthologs for LINC00515 Gene
Paralogs for LINC00515 Gene
No data available for Paralogs for LINC00515 Gene
Variants for LINC00515 Gene
Additional Variant Information for LINC00515 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC00515
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC00515 Gene
Disorders for LINC00515 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| ovarian cancer |
|
Search LINC00515 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for LINC00515
No data available for UniProtKB/Swiss-Prot and Genatlas for LINC00515 Gene
Publications for LINC00515 Gene
- Downregulation of LINC00515 in high-grade serous ovarian cancer and its relationship with platinum resistance. (PMID: 31140829) Ni MW … Zheng ZG (Biomarkers in medicine 2019) 2 3
- Knockdown of Linc00515 Inhibits Multiple Myeloma Autophagy and Chemoresistance by Upregulating miR-140-5p and Downregulating ATG14. (PMID: 30121664) Lu D … Xiao M (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2018) 3
Products for LINC00515 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00515
- Origene Custom Protein Services for LINC00515
- Browse OriGene Inhibitory RNA Products For LINC00515
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC00515
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC00515
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC00515
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC00515
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC00515
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC00515
Sources for LINC00515 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB