Aliases for LINC00337 Gene

Subcategory (RNA class) for LINC00337 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC00337 Gene

  • Long Intergenic Non-Protein Coding RNA 337 2 3 5
  • LINC00337 2 5 165
  • NCRNA00337 3 4
  • C1orf211 3 4
  • Putative Uncharacterized Protein Encoded By LINC00337 4
  • Chromosome 1 Open Reading Frame 211 2
  • Non-Protein Coding RNA 337 2
  • NONHSAG000235.2 91
  • HSALNG0000511 164
  • MGC40168 2

External Ids for LINC00337 Gene

Previous HGNC Symbols for LINC00337 Gene

  • C1orf211
  • NCRNA00337

Previous GeneCards Identifiers for LINC00337 Gene

  • GC01P006297

Summaries for LINC00337 Gene

GeneCards Summary for LINC00337 Gene

LINC00337 (Long Intergenic Non-Protein Coding RNA 337) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC00337 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00337 Gene

Genomics for LINC00337 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC00337 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC00337 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC00337 Gene

Genomic Locations for LINC00337 Gene
chr1:6,234,692-6,241,657
(GRCh38/hg38)
Size:
6,966 bases
Orientation:
Plus strand
chr1:6,296,300-6,299,504
(GRCh37/hg19)
Size:
3,205 bases
Orientation:
Plus strand

Genomic View for LINC00337 Gene

Genes around LINC00337 on UCSC Golden Path with GeneCards custom track
LINC00337 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC00337 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00337 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00337 Gene

Proteins for LINC00337 Gene

  • Protein details for LINC00337 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N6G1-CA211_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00337
    Protein Accession:
    Q8N6G1

    Protein attributes for LINC00337 Gene

    Size:
    96 amino acids
    Molecular mass:
    10504 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00337 Gene

Post-translational modifications for LINC00337 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00337 Gene

Domains & Families for LINC00337 Gene

Gene Families for LINC00337 Gene

Protein Domains for LINC00337 Gene

ProtoNet:
genes like me logo Genes that share domains with LINC00337: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00337 Gene

Function for LINC00337 Gene

Phenotypes From GWAS Catalog for LINC00337 Gene

Phenotypes for LINC00337 Gene

GenomeRNAi human phenotypes for LINC00337:
genes like me logo Genes that share phenotypes with LINC00337: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC00337

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00337 Gene

Localization for LINC00337 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00337 Gene

Pathways & Interactions for LINC00337 Gene

PathCards logo

SuperPathways for LINC00337 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC00337 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC00337 Gene

Drugs & Compounds for LINC00337 Gene

No Compound Related Data Available

Transcripts for LINC00337 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00337 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075C4D1_9606 lncRNA 1642 3

HGNC: 28620,

RefSeq: NR_103534,

LNCipedia: LINC00337:10,

URS000048F23A_9606 lncRNA 1302 3

Ensembl: ENST00000429480 (view in UCSC) ,

LNCipedia: LINC00337:4,

NONCODE: NONHSAT000637.2,

URS00003AB1DD_9606 lncRNA 1138 3

Ensembl: ENST00000441724 (view in UCSC) ,

LncBook: HSALNT0001084,

LNCipedia: LINC00337:1,

URS0000DB945B_9606 lncRNA 2040 1

Ensembl: ENST00000650463 (view in UCSC) ,

URS00008B324D_9606 lncRNA 1640 2

LNCipedia: LINC00337:2,

NONCODE: NONHSAT000635.2,

LINC00337 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC00337 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC00337

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00337 Gene

No ASD Table

Relevant External Links for LINC00337 Gene

GeneLoc Exon Structure for
LINC00337

Expression for LINC00337 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC00337 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00337 Gene

This gene is overexpressed in Testis (x12.6) and Liver (x5.8).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC00337

SOURCE GeneReport for Unigene cluster for LINC00337 Gene:

Hs.185688
genes like me logo Genes that share expression patterns with LINC00337: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00337 Gene

Orthologs for LINC00337 Gene

Evolution for LINC00337 Gene

ENSEMBL:
Gene Tree for LINC00337 (if available)
TreeFam:
Gene Tree for LINC00337 (if available)

No data available for Orthologs for LINC00337 Gene

Paralogs for LINC00337 Gene

No data available for Paralogs for LINC00337 Gene

Variants for LINC00337 Gene

Additional dbSNP identifiers (rs#s) for LINC00337 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC00337 Gene

Variant ID Type Subtype PubMed ID
dgv28n106 CNV deletion 24896259
dgv8n67 CNV gain 20364138
nsv508825 CNV insertion 20534489
nsv545236 CNV loss 21841781
nsv831425 CNV loss 17160897

Additional Variant Information for LINC00337 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC00337

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC00337 Gene

Disorders for LINC00337 Gene

Additional Disease Information for LINC00337

No disorders were found for LINC00337 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00337 Gene

Publications for LINC00337 Gene

  1. Long noncoding RNA LINC00337 promote gastric cancer proliferation through repressing p21 mediated by EZH2. (PMID: 31217892) Hu B … Li L (American journal of translational research 2019) 2 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for LINC00337 Gene

Sources for LINC00337 Gene