Aliases for LINC00184 Gene

Subcategory (RNA class) for LINC00184 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC00184 Gene

  • Long Intergenic Non-Protein Coding RNA 184 2 3 5
  • LINC00184 2 170
  • Non-Protein Coding RNA 184 2
  • HSALNG0011620 169
  • NONHSAG004682 94
  • NCRNA00184 3
  • HANC 3

External Ids for LINC00184 Gene

Previous HGNC Symbols for LINC00184 Gene

  • NCRNA00184

Previous GeneCards Identifiers for LINC00184 Gene

  • GC01P234767

Summaries for LINC00184 Gene

GeneCards Summary for LINC00184 Gene

LINC00184 (Long Intergenic Non-Protein Coding RNA 184) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC00184 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00184 Gene

Genomics for LINC00184 Gene

GeneHancer (GH) Regulatory Elements for LINC00184 Gene

Promoters and enhancers for LINC00184 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC00184 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC00184 Gene

Genomic Locations for LINC00184 Gene
chr1:234,629,283-234,637,158
(GRCh38/hg38)
Size:
7,876 bases
Orientation:
Plus strand
chr1:234,765,057-234,770,526
(GRCh37/hg19)
Size:
5,470 bases
Orientation:
Plus strand

Genomic View for LINC00184 Gene

Genes around LINC00184 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00184 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00184 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00184 Gene

Proteins for LINC00184 Gene

Post-translational modifications for LINC00184 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00184 Gene

Domains & Families for LINC00184 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00184 Gene

Function for LINC00184 Gene

Phenotypes From GWAS Catalog for LINC00184 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00184 Gene

Localization for LINC00184 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for LINC00184 gene
Compartment Confidence
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00184 Gene

Pathways & Interactions for LINC00184 Gene

PathCards logo

SuperPathways for LINC00184 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC00184 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC00184 Gene

Drugs & Compounds for LINC00184 Gene

No Compound Related Data Available

Transcripts for LINC00184 Gene

mRNA/cDNA for LINC00184 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(9) RNACentral transcripts :
(2) NONCODE transcripts :
(6) LncBook transcripts :
(7) LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00184 Gene

No ASD Table

Relevant External Links for LINC00184 Gene

GeneLoc Exon Structure for
LINC00184
ECgene alternative splicing isoforms for
LINC00184

Expression for LINC00184 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC00184 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00184 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.9) and Brain - Cerebellum (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of LINC00184 Gene:

LINC00184

SOURCE GeneReport for Unigene cluster for LINC00184 Gene:

Hs.209162
genes like me logo Genes that share expression patterns with LINC00184: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00184 Gene

Orthologs for LINC00184 Gene

Evolution for LINC00184 Gene

ENSEMBL:
Gene Tree for LINC00184 (if available)
TreeFam:
Gene Tree for LINC00184 (if available)

No data available for Orthologs for LINC00184 Gene

Paralogs for LINC00184 Gene

No data available for Paralogs for LINC00184 Gene

Variants for LINC00184 Gene

Sequence variations from dbSNP and Humsavar for LINC00184 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000217931 -- 234,633,665(+) G/A non_coding_transcript_variant
rs1000524158 -- 234,628,664(+) G/C upstream_transcript_variant
rs1000901310 -- 234,632,581(+) C/G intron_variant
rs1001053072 -- 234,634,913(+) C/G downstream_transcript_variant
rs1001118806 -- 234,628,943(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC00184 Gene

Variant ID Type Subtype PubMed ID
nsv832914 CNV loss 17160897

Additional Variant Information for LINC00184 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC00184

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC00184 Gene

Disorders for LINC00184 Gene

Additional Disease Information for LINC00184

No disorders were found for LINC00184 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00184 Gene

Publications for LINC00184 Gene

No publications were found for LINC00184 Gene.

Products for LINC00184 Gene

Sources for LINC00184 Gene