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Aliases for LINC00114 Gene
Subcategory (RNA class) for LINC00114 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC00114 Gene
External Ids for LINC00114 Gene
- HGNC: 1265
- Entrez Gene: 400866
- Ensembl: ENSG00000223806
- OMIM: 611723
- UniProtKB: Q6XXX2
Previous HGNC Symbols for LINC00114 Gene
- C21orf24
- NCRNA00114
Previous GeneCards Identifiers for LINC00114 Gene
- GC21M040111
Summaries for LINC00114 Gene
GeneCards Summary for LINC00114 Gene
LINC00114 (Long Intergenic Non-Protein Coding RNA 114) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC00114 Gene
- HGNC(1265)
- Entrez Gene(400866)
- Ensembl(ENSG00000223806)
- OMIM(611723)
- UniProtKB(Q6XXX2)
- Open Targets Platform(ENSG00000223806)
- Search for LINC00114 at DataMed
- Search for LINC00114 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00114 Gene
Genomics for LINC00114 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC00114 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC00114 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC00114 Gene
Genomic Locations for LINC00114 Gene
- chr21:38,733,890-38,773,477
- (GRCh38/hg38)
- Size:
- 39,588 bases
- Orientation:
- Minus strand
- chr21:40,110,879-40,145,401
- (GRCh37/hg19)
- Size:
- 34,523 bases
- Orientation:
- Minus strand
Genomic View for LINC00114 Gene
Genes around LINC00114 on UCSC Golden Path with GeneCards custom track
LINC00114 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 21q22.2 by HGNC
- 21q22.2 by Entrez Gene
- 21q22.2 by Ensembl
LINC00114 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC00114 Gene
Proteins for LINC00114 Gene
-
Protein details for LINC00114 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6XXX2-CU024_HUMAN
- Recommended name:
- Putative uncharacterized protein encoded by LINC00114
- Protein Accession:
- Q6XXX2
Protein attributes for LINC00114 Gene
- Size:
- 140 amino acids
- Molecular mass:
- 15753 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for LINC00114 Gene
No Post-translational modifications
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for LINC00114
- Novus Biologicals Antibodies for LINC00114
- Invitrogen Antibodies for LINC00114 (AFLGC-LINC00114)
- antibodies-online: Show 4 available NCRNA00114 Antibodies ranked by validation data
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00114
- Origene Custom Protein Services for LINC00114
No data available for DME Specific Peptides for LINC00114 Gene
Domains & Families for LINC00114 Gene
Gene Families for LINC00114 Gene
Protein Domains for LINC00114 Gene
- ProtoNet:
No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00114 Gene
Function for LINC00114 Gene
Phenotypes From GWAS Catalog for LINC00114 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for LINC00114 - Select products 50% OFF >
- * LINC00114 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for LINC00114
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LINC00114
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LINC00114
- Browse OriGene Inhibitory RNA Products For LINC00114
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC00114
Clone Products
- Applied Biological Materials (abm): Clones for LINC00114 - Select products 50% OFF >
- * LINC00114 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LINC00114
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00114 Gene
Localization for LINC00114 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00114 Gene
Transcripts for LINC00114 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00114 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000009D511_9606 | lncRNA | 1790 | 5 |
HGNC: 1265, Ensembl: ENST00000411989 (view in UCSC) , LncBook: HSALNT0273548, LNCipedia: LINC00114:11, NONCODE: NONHSAT082120.2, |
| URS000014F4E1_9606 | lncRNA | 681 | 4 |
Ensembl: ENST00000448579 (view in UCSC) , LncBook: HSALNT0273549, LNCipedia: LINC00114:12, NONCODE: NONHSAT082121.2, |
| URS000051414D_9606 | lncRNA | 827 | 2 |
Ensembl: ENST00000429621 (view in UCSC) , LNCipedia: LINC00114:10, |
| URS0000EF2F9B_9606 | lncRNA | 1516 | 1 |
Ensembl: ENST00000663481 (view in UCSC) , |
| URS0000CCE02D_9606 | lncRNA | 893 | 1 |
RefSeq: NR_027066, |
LINC00114 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC00114 Gene
- 1 REFSEQ mRNAs :
- 9 NCBI additional mRNA sequence :
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for LINC00114 - Select products 50% OFF >
- * LINC00114 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for LINC00114
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LINC00114
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LINC00114
- Browse OriGene Inhibitory RNA Products For LINC00114
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC00114
Clone Products
- Applied Biological Materials (abm): Clones for LINC00114 - Select products 50% OFF >
- * LINC00114 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LINC00114
Relevant External Links for LINC00114 Gene
- GeneLoc Exon Structure for
- LINC00114
Expression for LINC00114 Gene
mRNA differential expression in normal tissues according to GTEx for LINC00114 Gene
This gene is overexpressed in Colon - Transverse (x9.7), Small Intestine - Terminal Ileum (x7.5), Testis (x4.9), and Cervix - Endocervix (x4.3).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC00114
SOURCE GeneReport for Unigene cluster for LINC00114 Gene:
Hs.278704mRNA Expression by UniProt/SwissProt for LINC00114 Gene:
Q6XXX2-CU024_HUMAN
Tissue specificity:
Expressed in a range of cell lines, including B-cell lymphoma and prostate.
Primer Products
-
OriGene qPCR primer pairs for LINC00114
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00114 Gene
Orthologs for LINC00114 Gene
No data available for Orthologs for LINC00114 Gene
Paralogs for LINC00114 Gene
No data available for Paralogs for LINC00114 Gene
Variants for LINC00114 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for LINC00114 Gene
| SNP ID | Clinical significance and condition | Chr 21 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs11908743 | - | p.Ala52Ser | |||
| rs11908799 | - | p.Asn39Lys | |||
| rs16996776 | - | p.Met104Arg | |||
| rs2836662 | - | p.Ser21Thr |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv4431n100 | CNV | gain | 25217958 |
| dgv4432n100 | CNV | gain | 25217958 |
| dgv534n27 | CNV | gain | 19166990 |
| dgv7833n54 | CNV | gain | 21841781 |
| esv3568191 | CNV | loss | 25503493 |
| esv3575390 | CNV | gain | 25503493 |
| esv3647006 | CNV | loss | 21293372 |
| esv3647007 | CNV | gain | 21293372 |
| esv3647008 | CNV | loss | 21293372 |
| esv3647009 | CNV | loss | 21293372 |
| esv3893409 | CNV | gain | 25118596 |
| nsv1058591 | CNV | gain | 25217958 |
| nsv1160714 | CNV | duplication | 26073780 |
| nsv3517 | CNV | insertion | 18451855 |
| nsv470900 | CNV | gain | 18288195 |
| nsv516348 | CNV | gain | 19592680 |
| nsv953364 | CNV | duplication | 24416366 |
| nsv954290 | CNV | deletion | 24416366 |
Additional Variant Information for LINC00114 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC00114
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC00114 Gene
Disorders for LINC00114 Gene
Additional Disease Information for LINC00114
No disorders were found for LINC00114 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00114 Gene
Publications for LINC00114 Gene
- Detailed mapping of the ERG-ETS2 interval of human chromosome 21 and comparison with the region of conserved synteny on mouse chromosome 16. (PMID: 14693372) Owczarek CM … Hertzog PJ (Gene 2004) 3 4
- The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3
Products for LINC00114 Gene
- Custom Antibody ServicesOriGene Antibodies for LINC00114
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00114
- Origene Custom Protein Services for LINC00114
- Origene shrna and RNAi products in human, mouse, rat for LINC00114
- Browse OriGene Inhibitory RNA Products For LINC00114
- OriGene qPCR primer pairs for LINC00114
- Browse CRISPR knockouts for LINC00114
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC00114
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for LINC00114
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Invitrogen Antibodies for LINC00114 (AFLGC-LINC00114)
- VectorBuilder Custom and pre-made DNA vectors for LINC00114 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for LINC00114 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for LINC00114 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for LINC00114 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for LINC00114
- antibodies-online: Show 4 available NCRNA00114 Antibodies ranked by validation data
- antibodies-online: Search results for available NCRNA00114 related products ranked by validation data
- antibodies-online: Search results for available NCRNA00114 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LINC00114
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LINC00114
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC00114
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC00114
Sources for LINC00114 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB