Aliases for LIF-AS2 Gene

Data sources for LIF-AS2 Gene:

RNA type for LIF-AS2 Gene

lncRNA

Aliases for LIF-AS2 Gene

External Ids for LIF-AS2 Gene

Summaries for LIF-AS2 Gene

GeneCards Summary for LIF-AS2 Gene

LIF-AS2 (LIF Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LIF-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LIF-AS2 Gene

Genomics for LIF-AS2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LIF-AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LIF-AS2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LIF-AS2 Gene

Latest Assembly
chr22:30,245,579-30,246,998
(GRCh38/hg38)
Size:
1,420 bases
Orientation:
Plus strand

Previous Assembly
chr22:30,642,199-30,642,982
(GRCh37/hg19 by Entrez Gene)
Size:
784 bases
Orientation:
Plus strand

chr22:30,641,984-30,642,987
(GRCh37/hg19 by Ensembl)
Size:
1,004 bases
Orientation:
Plus strand

Genomic View for LIF-AS2 Gene

Genes around LIF-AS2 on UCSC Golden Path with GeneCards custom track
LIF-AS2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LIF-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LIF-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LIF-AS2 Gene

Proteins for LIF-AS2 Gene

Post-translational modifications for LIF-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LIF-AS2 Gene

Domains & Families for LIF-AS2 Gene

Gene Families for LIF-AS2 Gene

genes like me logo Genes that share domains with LIF-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LIF-AS2 Gene

Function for LIF-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LIF-AS2 Gene

Localization for LIF-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LIF-AS2 Gene

Pathways & Interactions for LIF-AS2 Gene

PathCards logo

SuperPathways for LIF-AS2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LIF-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LIF-AS2 Gene

Drugs & Compounds for LIF-AS2 Gene

No Compound Related Data Available

Transcripts for LIF-AS2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LIF-AS2 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000011F3B8_9606 lncRNA 794 3

Ensembl: ENST00000608354 (view in UCSC) ,

LncBook: HSALNT0276875,

NONCODE: NONHSAT084761.2,

URS0000BC43CD_9606 lncRNA 784 1

RefSeq: NR_148946,

URS0001BDE346_9606 lncRNA 794 1

LncBook: HSALNT0276875,

URS00008B721C_9606 lncRNA 723 1

NONCODE: NONHSAT192237.1,

URS0000EB6746_9606 lncRNA 570 1

LncBook: HSALNT0276874,

LIF-AS2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LIF-AS2 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LIF-AS2 Gene

No ASD Table

Relevant External Links for LIF-AS2 Gene

GeneLoc Exon Structure for
LIF-AS2

Expression for LIF-AS2 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LIF-AS2

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LIF-AS2 Gene

Orthologs for LIF-AS2 Gene

Evolution for LIF-AS2 Gene

ENSEMBL:
Gene Tree for LIF-AS2 (if available)
TreeFam:
Gene Tree for LIF-AS2 (if available)
Alliance of Genome Resources:
Additional Orthologs for LIF-AS2

No data available for Orthologs for LIF-AS2 Gene

Paralogs for LIF-AS2 Gene

No data available for Paralogs for LIF-AS2 Gene

Variants for LIF-AS2 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LIF-AS2 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LIF-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LIF-AS2
Leiden Open Variation Database (LOVD)
LIF-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LIF-AS2 Gene

Disorders for LIF-AS2 Gene

Additional Disease Information for LIF-AS2

Open Targets Platform
Open Targets Platform

No disorders were found for LIF-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LIF-AS2 Gene

Publications for LIF-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LIF-AS2 Gene

Products for LIF-AS2 Gene

Sources for LIF-AS2 Gene