Aliases for LGALS9DP Gene

Aliases for LGALS9DP Gene

  • Galectin 9D, Pseudogene 2 3 5
  • Lectin, Galactoside-Binding, Soluble, 9D, Pseudogene 2 3
  • Lectin, Galactoside-Binding, Soluble, 9 Pseudogene 3

External Ids for LGALS9DP Gene

Previous GeneCards Identifiers for LGALS9DP Gene

  • GC17P026065

Summaries for LGALS9DP Gene

GeneCards Summary for LGALS9DP Gene

LGALS9DP (Galectin 9D, Pseudogene) is a Pseudogene.

Additional gene information for LGALS9DP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LGALS9DP Gene

Genomics for LGALS9DP Gene

GeneHancer (GH) Regulatory Elements for LGALS9DP Gene

Promoters and enhancers for LGALS9DP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J027748 Enhancer 0.6 ENCODE 0.4 +10.5 10503 0.2 NR2F1 NR2F6 TEAD4 SP1 CTCF NR2C1 CTBP1 NR2C2 TEAD1 NR2F2 piR-43821-002 LGALS9DP
GH17J027741 Enhancer 0.4 Ensembl 0.4 +6.6 6624 6.4 RFX1 PKNOX1 NR2F2 LGALS9 LGALS9DP piR-43821-002
GH17J027752 Enhancer 0.2 Ensembl 0.4 +14.3 14324 0.2 piR-43821-002 LGALS9DP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LGALS9DP on UCSC Golden Path with GeneCards custom track

Genomic Locations for LGALS9DP Gene

Genomic Locations for LGALS9DP Gene
chr17:27,737,777-27,756,703
(GRCh38/hg38)
Size:
18,927 bases
Orientation:
Plus strand
chr17:26,064,803-26,083,729
(GRCh37/hg19)
Size:
18,927 bases
Orientation:
Plus strand

Genomic View for LGALS9DP Gene

Genes around LGALS9DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LGALS9DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LGALS9DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LGALS9DP Gene

Proteins for LGALS9DP Gene

Post-translational modifications for LGALS9DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for LGALS9DP Gene

Domains & Families for LGALS9DP Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LGALS9DP Gene

Function for LGALS9DP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LGALS9DP Gene

Localization for LGALS9DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LGALS9DP Gene

Pathways & Interactions for LGALS9DP Gene

PathCards logo

SuperPathways for LGALS9DP Gene

No Data Available

Gene Ontology (GO) - Biological Process for LGALS9DP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LGALS9DP Gene

Drugs & Compounds for LGALS9DP Gene

No Compound Related Data Available

Transcripts for LGALS9DP Gene

mRNA/cDNA for LGALS9DP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LGALS9DP Gene

No ASD Table

Relevant External Links for LGALS9DP Gene

GeneLoc Exon Structure for
LGALS9DP
ECgene alternative splicing isoforms for
LGALS9DP

Expression for LGALS9DP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LGALS9DP Gene

NURSA nuclear receptor signaling pathways regulating expression of LGALS9DP Gene:

LGALS9DP
genes like me logo Genes that share expression patterns with LGALS9DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LGALS9DP Gene

Orthologs for LGALS9DP Gene

Evolution for LGALS9DP Gene

ENSEMBL:
Gene Tree for LGALS9DP (if available)
TreeFam:
Gene Tree for LGALS9DP (if available)

No data available for Orthologs for LGALS9DP Gene

Paralogs for LGALS9DP Gene

No data available for Paralogs for LGALS9DP Gene

Variants for LGALS9DP Gene

Additional Variant Information for LGALS9DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LGALS9DP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LGALS9DP Gene

Disorders for LGALS9DP Gene

No disorders were found for LGALS9DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LGALS9DP Gene

Publications for LGALS9DP Gene

No publications were found for LGALS9DP Gene.

No data available for External Links for LGALS9DP Gene

Products for LGALS9DP Gene

Sources for LGALS9DP Gene