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Aliases for LEFTY3 Gene

Subcategory (RNA class) for LEFTY3 Gene

lncRNA

Aliases for LEFTY3 Gene

  • Left-Right Determination Factor 2 Pseudogene 3
  • AC099066.3 5

External Ids for LEFTY3 Gene

ORGUL Members for LEFTY3 Gene

Previous GeneCards Identifiers for LEFTY3 Gene

  • GC01U900023
  • GC01P222965
  • GC01P222297
  • GC01P224057
  • GC01P225991

Summaries for LEFTY3 Gene

GeneCards Summary for LEFTY3 Gene

LEFTY3 (Left-Right Determination Factor 2 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LEFTY3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LEFTY3 Gene

Genomics for LEFTY3 Gene

GeneHancer (GH) Regulatory Elements for LEFTY3 Gene

Promoters and enhancers for LEFTY3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J225809 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 7.3 +9.2 9191 5.7 HDGF FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 EPHX1 GC01P225813 ENSG00000255835 PYCR2 ENSG00000248322 LEFTY2 LEFTY3 SRP9 ITPKB GC01P225811
GH01J225776 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 7.4 -24.9 -24900 4.2 CLOCK DMAP1 YY1 ZNF213 E2F8 ZNF416 ZNF143 SP3 NFYC ZNF610 SRP9 ACBD3 ACBD3-AS1 LOC105373110 H3F3A LEFTY1 LEFTY3 EPHX1
GH01J225822 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 6.5 +22.2 22225 5.3 FOXA2 MLX ARID4B ZNF48 YY1 TCF12 ZNF121 GLIS2 NFKBIZ RXRA EPHX1 TMEM63A LEFTY1 ENSG00000255835 PYCR2 ENSG00000248322 LEFTY2 LEFTY3 SRP9 GC01P225813
GH01J225828 Enhancer 0.5 dbSUPER 6.5 +26.2 26209 1.6 RXRA HNF4G HNF4A ZKSCAN1 LEFTY3 EPHX1 GC01P225813 ENSG00000242861
GH01J225854 Enhancer 0.5 dbSUPER 4.7 +53.5 53536 3.7 ZNF316 ZMYM3 KDM1A MAFK TMEM63A PYCR2 LEFTY1 LEFTY2 ENSG00000255835 ENSG00000248322 LEFTY3 ENSG00000242861
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LEFTY3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LEFTY3 Gene

Genomic Locations for LEFTY3 Gene
chr1:225,803,148-225,803,453
(GRCh38/hg38)
Size:
306 bases
Orientation:
Plus strand
chr1:225,990,850-225,991,155
(GRCh37/hg19)
Size:
306 bases
Orientation:
Plus strand

Genomic View for LEFTY3 Gene

Genes around LEFTY3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LEFTY3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LEFTY3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LEFTY3 Gene

Function for LEFTY3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LEFTY3 Gene

Localization for LEFTY3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LEFTY3 Gene

Pathways & Interactions for LEFTY3 Gene

SuperPathways for LEFTY3 Gene

No Data Available

Interacting Proteins for LEFTY3 Gene

Gene Ontology (GO) - Biological Process for LEFTY3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LEFTY3 Gene

Drugs & Compounds for LEFTY3 Gene

No Compound Related Data Available

Transcripts for LEFTY3 Gene

mRNA/cDNA for LEFTY3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LEFTY3 Gene

No ASD Table

Relevant External Links for LEFTY3 Gene

GeneLoc Exon Structure for
LEFTY3

Expression for LEFTY3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LEFTY3 Gene

genes like me logo Genes that share expression patterns with LEFTY3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LEFTY3 Gene

Orthologs for LEFTY3 Gene

Evolution for LEFTY3 Gene

ENSEMBL:
Gene Tree for LEFTY3 (if available)
TreeFam:
Gene Tree for LEFTY3 (if available)

No data available for Orthologs for LEFTY3 Gene

Paralogs for LEFTY3 Gene

No data available for Paralogs for LEFTY3 Gene

Variants for LEFTY3 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LEFTY3 Gene

Disorders for LEFTY3 Gene

No disorders were found for LEFTY3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LEFTY3 Gene

Publications for LEFTY3 Gene

  1. Distinct transcriptional regulation and phylogenetic divergence of human LEFTY genes. (PMID: 10886363) Yashiro K … Hamada H (Genes to cells : devoted to molecular & cellular mechanisms 2000) 3 58

Products for LEFTY3 Gene

Sources for LEFTY3 Gene

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