Aliases for LDHAP4 Gene

Aliases for LDHAP4 Gene

  • Lactate Dehydrogenase A Pseudogene 4 2 3 5
  • Lactate Dehydrogenase A-Like 4 2 3
  • Lactate Dehydrogenase Pseudogene 3
  • LDHAL4 3
  • LDHAP4 5

External Ids for LDHAP4 Gene

Previous HGNC Symbols for LDHAP4 Gene

  • LDHAL4

Summaries for LDHAP4 Gene

GeneCards Summary for LDHAP4 Gene

LDHAP4 (Lactate Dehydrogenase A Pseudogene 4) is a Pseudogene.

Additional gene information for LDHAP4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LDHAP4 Gene

Genomics for LDHAP4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LDHAP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J014294 Enhancer 0.8 ENCODE dbSUPER 5.5 +627.5 627549 1.5 YY1 FOXA2 RXRA JUND HNF4A ZNF133 REST MAX SP1 ZNF202 NFIB LDHAP4 ENSG00000225472 RPL7AP47
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LDHAP4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LDHAP4 Gene

Latest Assembly
chr9:14,920,689-14,922,431
(GRCh38/hg38)
Size:
1,743 bases
Orientation:
Minus strand

Previous Assembly
chr9:14,920,687-14,922,429
(GRCh37/hg19 by Entrez Gene)
Size:
1,743 bases
Orientation:
Minus strand

chr9:14,921,335-14,922,332
(GRCh37/hg19 by Ensembl)
Size:
998 bases
Orientation:
Minus strand

Genomic View for LDHAP4 Gene

Genes around LDHAP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LDHAP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LDHAP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LDHAP4 Gene

Proteins for LDHAP4 Gene

Post-translational modifications for LDHAP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LDHAP4 Gene

Domains & Families for LDHAP4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LDHAP4 Gene

Function for LDHAP4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LDHAP4 Gene

Localization for LDHAP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LDHAP4 Gene

Pathways & Interactions for LDHAP4 Gene

PathCards logo

SuperPathways for LDHAP4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LDHAP4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LDHAP4 Gene

Drugs & Compounds for LDHAP4 Gene

No Compound Related Data Available

Transcripts for LDHAP4 Gene

mRNA/cDNA for LDHAP4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LDHAP4 Gene

No ASD Table

Relevant External Links for LDHAP4 Gene

GeneLoc Exon Structure for
LDHAP4

Expression for LDHAP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LDHAP4 Gene

genes like me logo Genes that share expression patterns with LDHAP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LDHAP4 Gene

Orthologs for LDHAP4 Gene

Evolution for LDHAP4 Gene

ENSEMBL:
Gene Tree for LDHAP4 (if available)
TreeFam:
Gene Tree for LDHAP4 (if available)
Alliance of Genome Resources:
Additional Orthologs for LDHAP4

No data available for Orthologs for LDHAP4 Gene

Paralogs for LDHAP4 Gene

No data available for Paralogs for LDHAP4 Gene

Variants for LDHAP4 Gene

Additional Variant Information for LDHAP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LDHAP4
Leiden Open Variation Database (LOVD)
LDHAP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LDHAP4 Gene

Disorders for LDHAP4 Gene

No disorders were found for LDHAP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LDHAP4 Gene

Publications for LDHAP4 Gene

  1. Mapping of human lactate dehydrogenase-A, -B, and -C genes and their related sequences: the gene for LDHC is located with that for LDHA on chromosome 11. (PMID: 3180843) Li SS … Deaven LL (Cytogenetics and cell genetics 1988) 2 3
  2. Genomic organization of human lactate dehydrogenase-A gene. (PMID: 3000353) Chung FZ … LI SS (The Biochemical journal 1985) 3

Products for LDHAP4 Gene

Sources for LDHAP4 Gene