Aliases for LDHAL6FP Gene

Aliases for LDHAL6FP Gene

  • Lactate Dehydrogenase A Like 6F, Pseudogene 2 3 5
  • Lactate Dehydrogenase A-Like 6B Pseudogene 3

External Ids for LDHAL6FP Gene

Previous GeneCards Identifiers for LDHAL6FP Gene

  • GC06M157723

Summaries for LDHAL6FP Gene

GeneCards Summary for LDHAL6FP Gene

LDHAL6FP (Lactate Dehydrogenase A Like 6F, Pseudogene) is a Pseudogene.

Additional gene information for LDHAL6FP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LDHAL6FP Gene

Genomics for LDHAL6FP Gene

GeneHancer (GH) Regulatory Elements for LDHAL6FP Gene

Promoters and enhancers for LDHAL6FP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J157298 Enhancer 0.3 Ensembl 500.7 +1.9 1850 1.6 PRDM1 ZBTB44 LDHAL6FP TMEM242 hsa-miR-5095-441 lnc-SERAC1-13
GH06J157303 Enhancer 0.2 Ensembl 500.7 -1.8 -1750 0.4 LDHAL6FP lnc-SERAC1-12 lnc-SERAC1-13 TMEM242
GH06J158024 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 4.3 -726.2 -726249 4.8 CTCF TCF12 POLR2G RBAK JUND FOS ZNF639 ZIC2 REST ZBTB10 SYNJ2 SNX9 LOC100420839 RNU6-786P DYNLT1 LDHAL6FP RF00017-5907 RF00017-5906
GH06J158029 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 5.1 -731.2 -731190 3 TCF12 JUND FOS ZNF639 ZIC2 ZNF263 ZNF423 TRIM28 KLF7 ZNF740 RF00017-5907 SYNJ2 SNX9 LDHAL6FP lnc-SERAC1-7
GH06J158037 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 4.6 -741.1 -741131 7.3 EP300 FOXK2 CTCF ZSCAN5C NRF1 TCF12 POLR2G SP1 NCOR1 JUND SYNJ2 RNU6-786P LDHAL6FP SNX9 RF00017-5907 lnc-SERAC1-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LDHAL6FP on UCSC Golden Path with GeneCards custom track

Genomic Locations for LDHAL6FP Gene

Genomic Locations for LDHAL6FP Gene
chr6:157,298,627-157,300,251
(GRCh38/hg38)
Size:
1,625 bases
Orientation:
Minus strand
chr6:157,719,882-157,721,256
(GRCh37/hg19)
Size:
1,375 bases
Orientation:
Minus strand

Genomic View for LDHAL6FP Gene

Genes around LDHAL6FP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LDHAL6FP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LDHAL6FP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LDHAL6FP Gene

Proteins for LDHAL6FP Gene

Post-translational modifications for LDHAL6FP Gene

No Post-translational modifications

No data available for DME Specific Peptides for LDHAL6FP Gene

Domains & Families for LDHAL6FP Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LDHAL6FP Gene

Function for LDHAL6FP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LDHAL6FP Gene

Localization for LDHAL6FP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LDHAL6FP Gene

Pathways & Interactions for LDHAL6FP Gene

PathCards logo

SuperPathways for LDHAL6FP Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LDHAL6FP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LDHAL6FP Gene

Drugs & Compounds for LDHAL6FP Gene

No Compound Related Data Available

Transcripts for LDHAL6FP Gene

mRNA/cDNA for LDHAL6FP Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LDHAL6FP Gene

No ASD Table

Relevant External Links for LDHAL6FP Gene

GeneLoc Exon Structure for
LDHAL6FP

Expression for LDHAL6FP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LDHAL6FP Gene

mRNA differential expression in normal tissues according to GTEx for LDHAL6FP Gene

This gene is overexpressed in Testis (x16.4).
genes like me logo Genes that share expression patterns with LDHAL6FP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LDHAL6FP Gene

Orthologs for LDHAL6FP Gene

Evolution for LDHAL6FP Gene

ENSEMBL:
Gene Tree for LDHAL6FP (if available)
TreeFam:
Gene Tree for LDHAL6FP (if available)

No data available for Orthologs for LDHAL6FP Gene

Paralogs for LDHAL6FP Gene

No data available for Paralogs for LDHAL6FP Gene

Variants for LDHAL6FP Gene

Additional Variant Information for LDHAL6FP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LDHAL6FP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LDHAL6FP Gene

Disorders for LDHAL6FP Gene

Additional Disease Information for LDHAL6FP

No disorders were found for LDHAL6FP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LDHAL6FP Gene

Publications for LDHAL6FP Gene

No publications were found for LDHAL6FP Gene.

No data available for Mastermind for LDHAL6FP Gene

Products for LDHAL6FP Gene

Sources for LDHAL6FP Gene