Aliases for LCEP3 Gene

Aliases for LCEP3 Gene

  • Late Cornified Envelope Pseudogene 3 2 3
  • Late Cornified Envelope Family Pseudogene 5
  • AL139247.1 5

External Ids for LCEP3 Gene

Previous GeneCards Identifiers for LCEP3 Gene

  • GC01U901118
  • GC01P150896
  • GC01P152628

Summaries for LCEP3 Gene

GeneCards Summary for LCEP3 Gene

LCEP3 (Late Cornified Envelope Pseudogene 3) is a Pseudogene.

Additional gene information for LCEP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LCEP3 Gene

Genomics for LCEP3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LCEP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J152655 Promoter 0.3 EPDnew 600.7 -0.9 -898 0.1 LCEP3 LINC00302 LCE2D LCE3A LCE3D LCEP4 lnc-LCE3A-1
GH01J152663 Promoter 0.4 EPDnew 0.4 +7.0 7029 0.1 BHLHE40 LCE2D LCEP3 LCE3A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LCEP3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LCEP3 Gene

Genomic Locations for LCEP3 Gene
chr1:152,656,332-152,656,511
(GRCh38/hg38)
Size:
180 bases
Orientation:
Plus strand
chr1:152,628,808-152,628,987
(GRCh37/hg19)
Size:
180 bases
Orientation:
Plus strand

Genomic View for LCEP3 Gene

Genes around LCEP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LCEP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LCEP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LCEP3 Gene

Proteins for LCEP3 Gene

No data available for DME Specific Peptides for LCEP3 Gene

Domains & Families for LCEP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LCEP3 Gene

Function for LCEP3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LCEP3 Gene

Localization for LCEP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LCEP3 Gene

Pathways & Interactions for LCEP3 Gene

PathCards logo

SuperPathways for LCEP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LCEP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LCEP3 Gene

Drugs & Compounds for LCEP3 Gene

No Compound Related Data Available

Transcripts for LCEP3 Gene

mRNA/cDNA for LCEP3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for LCEP3 Gene

No ASD Table

Relevant External Links for LCEP3 Gene

GeneLoc Exon Structure for
LCEP3

Expression for LCEP3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LCEP3 Gene

Orthologs for LCEP3 Gene

Evolution for LCEP3 Gene

ENSEMBL:
Gene Tree for LCEP3 (if available)
TreeFam:
Gene Tree for LCEP3 (if available)

No data available for Orthologs for LCEP3 Gene

Paralogs for LCEP3 Gene

No data available for Paralogs for LCEP3 Gene

Variants for LCEP3 Gene

Additional Variant Information for LCEP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LCEP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LCEP3 Gene

Disorders for LCEP3 Gene

No disorders were found for LCEP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LCEP3 Gene

Publications for LCEP3 Gene

  1. Late cornified envelope family in differentiating epithelia--response to calcium and ultraviolet irradiation. (PMID: 15854049) Jackson B … Byrne C (The Journal of investigative dermatology 2005) 2 3

No data available for Mastermind for LCEP3 Gene

Products for LCEP3 Gene

Sources for LCEP3 Gene