Aliases for LARP1P1 Gene

Aliases for LARP1P1 Gene

  • LARP1 Pseudogene 1 2 3 5
  • La Ribonucleoprotein Domain Family Member 1 Pseudogene 1 2 3
  • HLA Complex Group 10 Pseudogene 2 3
  • DJ221C16.7 2 3
  • La Ribonucleoprotein Domain Family, Member 1 Pseudogene 1 2
  • LARP1P1 5
  • HCG10P 3

External Ids for LARP1P1 Gene

Previous HGNC Symbols for LARP1P1 Gene

  • HCG10P

Previous GeneCards Identifiers for LARP1P1 Gene

  • GC06P026175
  • GC06P026187
  • GC06P026260
  • GC06P026302
  • GC06P026245
  • GC06P026343
  • GC06P027316
  • GC06P027430
  • GC06P027565
  • GC06P028005
  • GC06P026385
  • GC06P026414
  • GC06P026485
  • GC06P026753
  • GC06P026852
  • GC06P026961
  • GC06P027062
  • GC06P027202

Summaries for LARP1P1 Gene

GeneCards Summary for LARP1P1 Gene

LARP1P1 (LARP1 Pseudogene 1) is a Pseudogene.

Additional gene information for LARP1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LARP1P1 Gene

Genomics for LARP1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LARP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J026163 Enhancer 0.6 ENCODE dbSUPER 600.7 -0.1 -89 1.1 POLR2A NFIC SMAD5 MLLT1 LARP1P1 lnc-HIST1H1E-1 ENSG00000283064 H2BC5 H2BC6
GH06J026164 Enhancer 0.3 dbSUPER 600.7 +1.2 1150 1.1 ATF4 LARP1P1 lnc-HIST1H1E-1 piR-32214-580 ENSG00000283064 H2BC5 H2BC6
GH06J026193 Promoter/Enhancer 2.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.8 +36.8 36759 14.6 ARHGAP35 SP1 HNRNPL CREB1 GATAD2A ATF7 TEAD4 PRDM10 REST ZNF629 H2AC7 H2BC7 H3C4 ENSG00000282988 RPS10P1 ABT1 BTN2A2 BTN2A1 HMGN4 BTN2A3P
GH06J026248 Promoter/Enhancer 2.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.1 +91.3 91279 13 CEBPG SP1 GATAD2A CTCF HNRNPL TEAD4 PRDM10 IKZF1 POLR2A BACH1 LOC105374986 ABT1 ZNF322 GUSBP2 H2AC9P H4C8 LARP1P1 BTN2A2 H4C3 ENSG00000272462
GH06J026086 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 10.1 -76.0 -75957 2.8 GATAD2A PRDM10 LEF1 IKZF1 MTA2 PHF21A RBFOX2 ZNF24 MTA1 PATZ1 HFE NONHSAG043229.2 ENSG00000272462 H1-2 H1-6 LARP1P1 BTN3A2 LOC108783645 H4C3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LARP1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LARP1P1 Gene

Genomic Locations for LARP1P1 Gene
chr6:26,164,033-26,168,176
(GRCh38/hg38)
Size:
4,144 bases
Orientation:
Plus strand
chr6:26,164,261-26,168,404
(GRCh37/hg19)
Size:
4,144 bases
Orientation:
Plus strand

Genomic View for LARP1P1 Gene

Genes around LARP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LARP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LARP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LARP1P1 Gene

Proteins for LARP1P1 Gene

Post-translational modifications for LARP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LARP1P1 Gene

Domains & Families for LARP1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LARP1P1 Gene

Function for LARP1P1 Gene

Phenotypes From GWAS Catalog for LARP1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LARP1P1 Gene

Localization for LARP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LARP1P1 Gene

Pathways & Interactions for LARP1P1 Gene

PathCards logo

SuperPathways for LARP1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LARP1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LARP1P1 Gene

Drugs & Compounds for LARP1P1 Gene

No Compound Related Data Available

Transcripts for LARP1P1 Gene

mRNA/cDNA for LARP1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for LARP1P1 Gene

No ASD Table

Relevant External Links for LARP1P1 Gene

GeneLoc Exon Structure for
LARP1P1

Expression for LARP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LARP1P1 Gene

genes like me logo Genes that share expression patterns with LARP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LARP1P1 Gene

Orthologs for LARP1P1 Gene

Evolution for LARP1P1 Gene

ENSEMBL:
Gene Tree for LARP1P1 (if available)
TreeFam:
Gene Tree for LARP1P1 (if available)

No data available for Orthologs for LARP1P1 Gene

Paralogs for LARP1P1 Gene

No data available for Paralogs for LARP1P1 Gene

Variants for LARP1P1 Gene

Additional Variant Information for LARP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LARP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LARP1P1 Gene

Disorders for LARP1P1 Gene

No disorders were found for LARP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LARP1P1 Gene

Publications for LARP1P1 Gene

No publications were found for LARP1P1 Gene.

No data available for Mastermind for LARP1P1 Gene

Products for LARP1P1 Gene

Sources for LARP1P1 Gene