Aliases for LAPTM4BP1 Gene

Aliases for LAPTM4BP1 Gene

  • Lysosomal Protein Transmembrane 4 Beta Pseudogene 1 2 3 5

External Ids for LAPTM4BP1 Gene

Summaries for LAPTM4BP1 Gene

GeneCards Summary for LAPTM4BP1 Gene

LAPTM4BP1 (Lysosomal Protein Transmembrane 4 Beta Pseudogene 1) is a Pseudogene.

Additional gene information for LAPTM4BP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LAPTM4BP1 Gene

Genomics for LAPTM4BP1 Gene

GeneHancer (GH) Regulatory Elements for LAPTM4BP1 Gene

Promoters and enhancers for LAPTM4BP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J153389 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 0.4 -9.6 -9637 2.4 POLR2A EP300 CTBP1 CTCF FOS CEBPB SPI1 RCOR1 ZFHX2 STAT3 lnc-S100A12-2 S100A8 S100A12 LAPTM4BP1
GH01J153384 Enhancer 0.8 FANTOM5 ENCODE 0.4 -5.3 -5317 2 POLR2A FOS SPI1 STAT3 REST MAX MYC S100A12 S100A9 S100A8 PGLYRP4 RNU6-160P S100A4 lnc-S100A12-2 LAPTM4BP1
GH01J153388 Enhancer 0.3 FANTOM5 0.4 -8.1 -8068 0.4 POLR2A S100A8 S100A9 S100A12 S100A7L2 lnc-S100A12-2 LAPTM4BP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LAPTM4BP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LAPTM4BP1 Gene

Genomic Locations for LAPTM4BP1 Gene
chr1:153,379,814-153,380,964
(GRCh38/hg38)
Size:
1,151 bases
Orientation:
Minus strand
chr1:153,352,290-153,353,440
(GRCh37/hg19)
Size:
1,151 bases
Orientation:
Minus strand

Genomic View for LAPTM4BP1 Gene

Genes around LAPTM4BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LAPTM4BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LAPTM4BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LAPTM4BP1 Gene

Proteins for LAPTM4BP1 Gene

Post-translational modifications for LAPTM4BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LAPTM4BP1 Gene

Domains & Families for LAPTM4BP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LAPTM4BP1 Gene

Function for LAPTM4BP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LAPTM4BP1 Gene

Localization for LAPTM4BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LAPTM4BP1 Gene

Pathways & Interactions for LAPTM4BP1 Gene

PathCards logo

SuperPathways for LAPTM4BP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LAPTM4BP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LAPTM4BP1 Gene

Drugs & Compounds for LAPTM4BP1 Gene

No Compound Related Data Available

Transcripts for LAPTM4BP1 Gene

mRNA/cDNA for LAPTM4BP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LAPTM4BP1 Gene

No ASD Table

Relevant External Links for LAPTM4BP1 Gene

GeneLoc Exon Structure for
LAPTM4BP1

Expression for LAPTM4BP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LAPTM4BP1 Gene

Orthologs for LAPTM4BP1 Gene

Evolution for LAPTM4BP1 Gene

ENSEMBL:
Gene Tree for LAPTM4BP1 (if available)
TreeFam:
Gene Tree for LAPTM4BP1 (if available)

No data available for Orthologs for LAPTM4BP1 Gene

Paralogs for LAPTM4BP1 Gene

No data available for Paralogs for LAPTM4BP1 Gene

Variants for LAPTM4BP1 Gene

Additional Variant Information for LAPTM4BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LAPTM4BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LAPTM4BP1 Gene

Disorders for LAPTM4BP1 Gene

No disorders were found for LAPTM4BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LAPTM4BP1 Gene

Publications for LAPTM4BP1 Gene

No publications were found for LAPTM4BP1 Gene.

No data available for Mastermind for LAPTM4BP1 Gene

Products for LAPTM4BP1 Gene

Sources for LAPTM4BP1 Gene