Aliases for KRT8P43 Gene

Aliases for KRT8P43 Gene

  • Keratin 8 Pseudogene 43 2 3 5
  • KRT8P43 5

External Ids for KRT8P43 Gene

Summaries for KRT8P43 Gene

GeneCards Summary for KRT8P43 Gene

KRT8P43 (Keratin 8 Pseudogene 43) is a Pseudogene.

Additional gene information for KRT8P43 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT8P43 Gene

Genomics for KRT8P43 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KRT8P43 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J024645 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 5.1 +48.2 48208 1.9 ZBTB10 MXD4 FEZF1 ZIC2 SIN3A MAX SAP130 ZEB2 GABPB1 CTBP1 KIAA0319 HSALNG0048619 ACOT13 TDP2 C6orf62 KRT8P43 GPLD1
GH06J024742 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE 4.5 +145.6 145594 2.6 BCL11A CEBPB ZNF395 IRF4 EP300 PRDM1 EBF1 TEAD3 YY1 STAT3 HSALNG0048629 C6orf62 GMNN KIAA0319 TDP2 KRT8P43 ENSG00000218806 lnc-C6orf62-2 LINC02828
GH06J024630 Enhancer 0.3 Ensembl 5.2 +33.4 33449 1.2 ZSCAN5C KIAA0319 ACOT13 KRT8P43 GPLD1
GH06J024680 Enhancer 0.2 Ensembl 4.5 +80.5 80549 0.2 piR-32130-040 KIAA0319 GMNN KRT8P43 MN309174-562 ACOT13 C6orf62
GH06J024589 Enhancer 0.4 Ensembl 0.4 -8.2 -8151 0.8 CHD2 SP1 ZSCAN5C KIAA0319 TDP2 ACOT13 piR-46703 KRT8P43 GPLD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT8P43 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT8P43 Gene

Latest Assembly
chr6:24,597,952-24,599,986
(GRCh38/hg38)
Size:
2,035 bases
Orientation:
Plus strand

Previous Assembly
chr6:24,598,180-24,600,214
(GRCh37/hg19 by Entrez Gene)
Size:
2,035 bases
Orientation:
Plus strand

chr6:24,598,240-24,600,018
(GRCh37/hg19 by Ensembl)
Size:
1,779 bases
Orientation:
Plus strand

Genomic View for KRT8P43 Gene

Genes around KRT8P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT8P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT8P43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT8P43 Gene

Proteins for KRT8P43 Gene

Post-translational modifications for KRT8P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT8P43 Gene

Domains & Families for KRT8P43 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT8P43 Gene

Function for KRT8P43 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT8P43 Gene

Localization for KRT8P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT8P43 Gene

Pathways & Interactions for KRT8P43 Gene

PathCards logo

SuperPathways for KRT8P43 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT8P43 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT8P43 Gene

Drugs & Compounds for KRT8P43 Gene

No Compound Related Data Available

Transcripts for KRT8P43 Gene

mRNA/cDNA for KRT8P43 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT8P43 Gene

No ASD Table

Relevant External Links for KRT8P43 Gene

GeneLoc Exon Structure for
KRT8P43

Expression for KRT8P43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT8P43 Gene

mRNA differential expression in normal tissues according to GTEx for KRT8P43 Gene

This gene is overexpressed in Whole Blood (x8.1), Testis (x6.7), and Pancreas (x4.6).
genes like me logo Genes that share expression patterns with KRT8P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT8P43 Gene

Orthologs for KRT8P43 Gene

Evolution for KRT8P43 Gene

ENSEMBL:
Gene Tree for KRT8P43 (if available)
TreeFam:
Gene Tree for KRT8P43 (if available)

No data available for Orthologs for KRT8P43 Gene

Paralogs for KRT8P43 Gene

No data available for Paralogs for KRT8P43 Gene

Variants for KRT8P43 Gene

Additional Variant Information for KRT8P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT8P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT8P43 Gene

Disorders for KRT8P43 Gene

No disorders were found for KRT8P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT8P43 Gene

Publications for KRT8P43 Gene

No publications were found for KRT8P43 Gene.

Products for KRT8P43 Gene

Sources for KRT8P43 Gene