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Aliases for KRT8P39 Gene

Aliases for KRT8P39 Gene

  • Keratin 8 Pseudogene 39 2 3 5

External Ids for KRT8P39 Gene

Previous GeneCards Identifiers for KRT8P39 Gene

  • GC12P069100

Summaries for KRT8P39 Gene

GeneCards Summary for KRT8P39 Gene

KRT8P39 (Keratin 8 Pseudogene 39) is a Pseudogene.

Additional gene information for KRT8P39 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT8P39 Gene

Genomics for KRT8P39 Gene

GeneHancer (GH) Regulatory Elements for KRT8P39 Gene

Promoters and enhancers for KRT8P39 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I068803 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE 22.3 +101.1 101146 7 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 MDM2 LOC100130075 NUP107 CPSF6 RPL10P12 RAP1B KRT8P39 C1GALT1P1 SLC35E3 CPM
GH12I068685 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 21.9 -18.7 -18726 3 MLX DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC ZC3H11A NUP107 LOC100507250 CPSF6 KRT8P39 RPL10P12 MDM2 RPL7P42
GH12I069358 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 19.7 +654.4 654446 2.2 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YEATS4 LYZ NUP107 CNOT2 KRT8P39 RAP1B RPL10P12 CPSF6 RN7SL804P
GH12I068609 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.9 -92.9 -92885 6.7 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RAP1B NUP107 CPSF6 MDM2 KRT8P39 CPM LINC02384 MDM1 RPL10P12 IFNG
GH12I068331 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 10.5 -372.5 -372537 3.4 HDGF PKNOX1 ATF1 ARID4B SIN3A ZNF48 YY1 GLIS2 ELK1 ZNF207 MDM1 LOC105369819 PIR51506 GC12P068332 NUP107 RPL10P12 KRT8P39 CPSF6 ENSG00000256273 LINC02421
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KRT8P39 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRT8P39 Gene

Genomic Locations for KRT8P39 Gene
chr12:68,705,556-68,707,265
(GRCh38/hg38)
Size:
1,710 bases
Orientation:
Plus strand
chr12:69,099,336-69,101,045
(GRCh37/hg19)

Genomic View for KRT8P39 Gene

Genes around KRT8P39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT8P39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT8P39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT8P39 Gene

Proteins for KRT8P39 Gene

Post-translational modifications for KRT8P39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT8P39 Gene

Domains & Families for KRT8P39 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT8P39 Gene

Function for KRT8P39 Gene

Phenotypes From GWAS Catalog for KRT8P39 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT8P39 Gene

Localization for KRT8P39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT8P39 Gene

Pathways & Interactions for KRT8P39 Gene

SuperPathways for KRT8P39 Gene

No Data Available

Interacting Proteins for KRT8P39 Gene

Gene Ontology (GO) - Biological Process for KRT8P39 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT8P39 Gene

Drugs & Compounds for KRT8P39 Gene

No Compound Related Data Available

Transcripts for KRT8P39 Gene

mRNA/cDNA for KRT8P39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT8P39 Gene

No ASD Table

Relevant External Links for KRT8P39 Gene

GeneLoc Exon Structure for
KRT8P39
ECgene alternative splicing isoforms for
KRT8P39

Expression for KRT8P39 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT8P39 Gene

NURSA nuclear receptor signaling pathways regulating expression of KRT8P39 Gene:

KRT8P39
genes like me logo Genes that share expression patterns with KRT8P39: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT8P39 Gene

Orthologs for KRT8P39 Gene

Evolution for KRT8P39 Gene

ENSEMBL:
Gene Tree for KRT8P39 (if available)
TreeFam:
Gene Tree for KRT8P39 (if available)

No data available for Orthologs for KRT8P39 Gene

Paralogs for KRT8P39 Gene

No data available for Paralogs for KRT8P39 Gene

Variants for KRT8P39 Gene

Additional Variant Information for KRT8P39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT8P39

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT8P39 Gene

Disorders for KRT8P39 Gene

No disorders were found for KRT8P39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT8P39 Gene

Publications for KRT8P39 Gene

  1. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for KRT8P39 Gene

Sources for KRT8P39 Gene

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