Aliases for KRT8P28 Gene

Aliases for KRT8P28 Gene

  • Keratin 8 Pseudogene 28 2 3 5
  • KRT8P28 5

External Ids for KRT8P28 Gene

Previous GeneCards Identifiers for KRT8P28 Gene

  • GC01M150149
  • GC01M151921
  • GC01M123299

Summaries for KRT8P28 Gene

GeneCards Summary for KRT8P28 Gene

KRT8P28 (Keratin 8 Pseudogene 28) is a Pseudogene.

Additional gene information for KRT8P28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT8P28 Gene

Genomics for KRT8P28 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KRT8P28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J151948 Enhancer 0.2 Ensembl 600.7 +1.8 1791 1.2 KRT8P28 lnc-S100A10-1 ENSG00000229021 THEM4 ENSG00000286581 lnc-OAZ3-16 S100A10
GH01J151950 Enhancer 0.2 Ensembl 600.7 +0.7 691 0.2 KRT8P28 lnc-S100A10-1 THEM4 THEM5 lnc-OAZ3-16 ENSG00000286581 S100A10
GH01J151953 Promoter/Enhancer 1 EPDnew ENCODE dbSUPER 0.7 -3.3 -3319 2.3 SP1 ZNF316 HNF4A ZNF664 MAFF EMSY MAFK THEM4 ENSG00000229021 S100A10 LINGO4 KRT8P28 ENSG00000286581 MN308804
GH01J151968 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.5 -19489 7.8 CREB1 CTCF ZNF629 LEF1 ZNF692 JUND FOXA1 PRDM1 ZIC2 PKNOX1 ENSG00000229021 PIP5K1A THEM4 ZNF687 S100A10 PI4KB S100A11 THEM5 CGN ENSG00000252840
GH01J151974 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -25.9 -25928 4.6 GATAD2A ZNF629 IKZF1 RCOR2 JUND ZIC2 POLR2A ZNF24 MTA1 IRF2 THEM4 PIP5K1A THEM5 C2CD4D C2CD4D-AS1 ENSG00000201134 S100A11 ENSG00000252840 CGN LINGO4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT8P28 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT8P28 Gene

Genomic Locations for KRT8P28 Gene
chr1:151,949,307-151,950,992
(GRCh38/hg38)
Size:
1,686 bases
Orientation:
Minus strand
chr1:151,921,871-151,923,466
(GRCh37/hg19)
Size:
1,596 bases
Orientation:
Minus strand

Genomic View for KRT8P28 Gene

Genes around KRT8P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT8P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT8P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT8P28 Gene

Proteins for KRT8P28 Gene

Post-translational modifications for KRT8P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT8P28 Gene

Domains & Families for KRT8P28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT8P28 Gene

Function for KRT8P28 Gene

Phenotypes From GWAS Catalog for KRT8P28 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT8P28 Gene

Localization for KRT8P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT8P28 Gene

Pathways & Interactions for KRT8P28 Gene

PathCards logo

SuperPathways for KRT8P28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT8P28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT8P28 Gene

Drugs & Compounds for KRT8P28 Gene

No Compound Related Data Available

Transcripts for KRT8P28 Gene

mRNA/cDNA for KRT8P28 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT8P28 Gene

No ASD Table

Relevant External Links for KRT8P28 Gene

GeneLoc Exon Structure for
KRT8P28

Expression for KRT8P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT8P28 Gene

genes like me logo Genes that share expression patterns with KRT8P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT8P28 Gene

Orthologs for KRT8P28 Gene

Evolution for KRT8P28 Gene

ENSEMBL:
Gene Tree for KRT8P28 (if available)
TreeFam:
Gene Tree for KRT8P28 (if available)

No data available for Orthologs for KRT8P28 Gene

Paralogs for KRT8P28 Gene

No data available for Paralogs for KRT8P28 Gene

Variants for KRT8P28 Gene

Additional Variant Information for KRT8P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT8P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT8P28 Gene

Disorders for KRT8P28 Gene

No disorders were found for KRT8P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT8P28 Gene

Publications for KRT8P28 Gene

No publications were found for KRT8P28 Gene.

No data available for Mastermind for KRT8P28 Gene

Products for KRT8P28 Gene

Sources for KRT8P28 Gene