Aliases for KRT8P16 Gene

Aliases for KRT8P16 Gene

  • Keratin 8 Pseudogene 16 2 3

External Ids for KRT8P16 Gene

Previous GeneCards Identifiers for KRT8P16 Gene

  • GC10M008596
  • GC10M008618

Summaries for KRT8P16 Gene

GeneCards Summary for KRT8P16 Gene

KRT8P16 (Keratin 8 Pseudogene 16) is a Pseudogene.

Additional gene information for KRT8P16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT8P16 Gene

Genomics for KRT8P16 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KRT8P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J008543 Enhancer 0.9 Ensembl ENCODE 600.7 -1.4 -1355 2.3 CEBPG FOXA1 ATF7 SCRT2 ZNF512B CTBP1 ZSCAN5C ZNF217 CUX1 HCFC1 KRT8P16 GATA3 LOC105376399
GH10J008581 Enhancer 0.7 ENCODE 0.3 -39.3 -39337 0.5 CREB1 FOXA1 RFX1 CTBP1 NFE2 ZNF444 ZNF217 GATAD2B CUX1 MBD2 LOC105376399 LOC105376398 KRT8P16 GATA3
GH10J008556 Enhancer 0.3 Ensembl 0.4 -14.3 -14300 0.2 FOXA1 GATA3 KRT8P16 LOC105376399 GATA3
GH10J008516 Enhancer 0.2 Ensembl 0.3 +25.5 25500 1 KRT8P37 GATA3 KRT8P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT8P16 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT8P16 Gene

Genomic Locations for KRT8P16 Gene
chr10:8,536,736-8,542,601
(GRCh38/hg38)
Size:
5,866 bases
Orientation:
Minus strand
chr10:8,578,699-8,584,564
(GRCh37/hg19)
Size:
5,866 bases
Orientation:
Minus strand

Genomic View for KRT8P16 Gene

Genes around KRT8P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT8P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT8P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT8P16 Gene

Proteins for KRT8P16 Gene

Post-translational modifications for KRT8P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT8P16 Gene

Domains & Families for KRT8P16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT8P16 Gene

Function for KRT8P16 Gene

Phenotypes From GWAS Catalog for KRT8P16 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT8P16 Gene

Localization for KRT8P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT8P16 Gene

Pathways & Interactions for KRT8P16 Gene

PathCards logo

SuperPathways for KRT8P16 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT8P16 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT8P16 Gene

Drugs & Compounds for KRT8P16 Gene

No Compound Related Data Available

Transcripts for KRT8P16 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for KRT8P16 Gene

No ASD Table

Relevant External Links for KRT8P16 Gene

GeneLoc Exon Structure for
KRT8P16

No data available for mRNA/cDNA for KRT8P16 Gene

Expression for KRT8P16 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT8P16 Gene

Orthologs for KRT8P16 Gene

No data available for Orthologs and Evolution for KRT8P16 Gene

Paralogs for KRT8P16 Gene

No data available for Paralogs for KRT8P16 Gene

Variants for KRT8P16 Gene

Additional Variant Information for KRT8P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT8P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT8P16 Gene

Disorders for KRT8P16 Gene

Additional Disease Information for KRT8P16

Genetic Association Database
(GAD)

No disorders were found for KRT8P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT8P16 Gene

Publications for KRT8P16 Gene

  1. Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population. (PMID: 21804548) Hirota T … Tamari M (Nature genetics 2011) 41
  2. A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3. (PMID: 18372905) Tomlinson IP … Houlston RS (Nature genetics 2008) 41
  3. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41
  5. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41

Products for KRT8P16 Gene

Sources for KRT8P16 Gene