Aliases for KRT18P56 Gene

Aliases for KRT18P56 Gene

  • Keratin 18 Pseudogene 56 2 3 5
  • KRT18P56 5

External Ids for KRT18P56 Gene

Summaries for KRT18P56 Gene

GeneCards Summary for KRT18P56 Gene

KRT18P56 (Keratin 18 Pseudogene 56) is a Pseudogene.

Additional gene information for KRT18P56 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT18P56 Gene

Genomics for KRT18P56 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KRT18P56 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J040052 Enhancer 0.7 Ensembl 0.4 -13.6 -13608 0.8 SOX6 TCF12 HES1 CEBPB JUN JUND NCOR1 FOSL1 NFIC EP300 LINC00603 KRT18P56 FJ601666-061 PTGER4 DAB2
GH05J040033 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.3 -32.7 -32701 1.8 EBF1 ATF7 TCF7 ZNF24 PTGER4 KRT18P56 FJ601666-061 LINC00603 DAB2
GH05J040017 Enhancer 0.7 Ensembl ENCODE 0.3 -49.0 -49009 1.6 CEBPB CHD2 JUN RCOR1 JUND MAX EP300 RAD21 SPI1 STAT3 PTGER4 LINC00603 KRT18P56 FJ601666-061 DAB2
GH05J040041 Enhancer 0.4 Ensembl ENCODE 0.4 -24.9 -24909 0.2 EP300 PTGER4 KRT18P56 FJ601666-061 LINC00603 DAB2
GH05J039946 Enhancer 0.7 Ensembl ENCODE 0.1 -119.3 -119308 4.2 CTCF REST RAD21 YY1 SMC3 RFX5 ZNF654 LINC00603 FJ601666-061 KRT18P56 DAB2 PTGER4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT18P56 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT18P56 Gene

Genomic Locations for KRT18P56 Gene
chr5:40,066,609-40,067,203
(GRCh38/hg38)
Size:
595 bases
Orientation:
Plus strand
chr5:40,066,753-40,067,302
(GRCh37/hg19)
Size:
550 bases
Orientation:
Plus strand

Genomic View for KRT18P56 Gene

Genes around KRT18P56 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P56 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P56 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P56 Gene

Proteins for KRT18P56 Gene

Post-translational modifications for KRT18P56 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P56 Gene

Domains & Families for KRT18P56 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT18P56 Gene

Function for KRT18P56 Gene

Phenotypes From GWAS Catalog for KRT18P56 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P56 Gene

Localization for KRT18P56 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT18P56 Gene

Pathways & Interactions for KRT18P56 Gene

PathCards logo

SuperPathways for KRT18P56 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT18P56 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT18P56 Gene

Drugs & Compounds for KRT18P56 Gene

No Compound Related Data Available

Transcripts for KRT18P56 Gene

mRNA/cDNA for KRT18P56 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P56 Gene

No ASD Table

Relevant External Links for KRT18P56 Gene

GeneLoc Exon Structure for
KRT18P56

Expression for KRT18P56 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT18P56 Gene

genes like me logo Genes that share expression patterns with KRT18P56: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P56 Gene

Orthologs for KRT18P56 Gene

Evolution for KRT18P56 Gene

ENSEMBL:
Gene Tree for KRT18P56 (if available)
TreeFam:
Gene Tree for KRT18P56 (if available)

No data available for Orthologs for KRT18P56 Gene

Paralogs for KRT18P56 Gene

No data available for Paralogs for KRT18P56 Gene

Variants for KRT18P56 Gene

Additional Variant Information for KRT18P56 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P56

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P56 Gene

Disorders for KRT18P56 Gene

No disorders were found for KRT18P56 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT18P56 Gene

Publications for KRT18P56 Gene

No publications were found for KRT18P56 Gene.

No data available for Mastermind for KRT18P56 Gene

Products for KRT18P56 Gene

Sources for KRT18P56 Gene