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Aliases for KRT18P48 Gene

Aliases for KRT18P48 Gene

  • Keratin 18 Pseudogene 48 2 3 5

External Ids for KRT18P48 Gene

Previous GeneCards Identifiers for KRT18P48 Gene

  • GC0XM152524
  • GC0XM152868

Summaries for KRT18P48 Gene

GeneCards Summary for KRT18P48 Gene

KRT18P48 (Keratin 18 Pseudogene 48) is a Pseudogene.

Additional gene information for KRT18P48 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT18P48 Gene

Genomics for KRT18P48 Gene

GeneHancer (GH) Regulatory Elements for KRT18P48 Gene

Promoters and enhancers for KRT18P48 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI153598 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 10.7 +5.8 5826 2.6 SIN3A ZNF121 POLR2B GLIS2 ZNF213 ZNF143 SP3 REST ZNF610 ZSCAN16 LOC105373383 CCNQ KRT18P48 CETN2
GH0XI153721 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 6.6 -120.2 -120245 7.2 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 IRF4 POLR2B KLF13 SP3 SP5 BCAP31 ABCD1 PNCK SLC6A8 KRT18P48 PDZD4 PLXNB3
GH0XI153474 Enhancer 1.1 Ensembl ENCODE dbSUPER 4.8 +128.9 128855 4.4 ZIC2 RAD21 ZKSCAN1 ZFHX2 POLR2A VEZF1 RCOR1 FOS CHD2 EGR2 KRT18P48 LOC105373381 TREX2 HAUS7
GH0XI153582 Enhancer 0.7 Ensembl ENCODE 7.5 +22.3 22325 0.9 POLR2A TARDBP ELF1 RELA KRT18P48 CCNQ GC0XP153580 LOC105373383 ATP2B3
GH0XI153537 Enhancer 0.8 ENCODE 5.3 +67.0 66972 2.7 RB1 ARID4B KLF17 ZNF76 FEZF1 ZNF2 RAD21 ZNF335 GLIS2 ARID2 KRT18P48 PLXNA3 ATP2B3 GC0XP153580
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KRT18P48 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRT18P48 Gene

Genomic Locations for KRT18P48 Gene
chrX:153,603,221-153,605,348
(GRCh38/hg38)
Size:
2,128 bases
Orientation:
Minus strand
chrX:152,868,676-152,870,803
(GRCh37/hg19)

Genomic View for KRT18P48 Gene

Genes around KRT18P48 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P48 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P48 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P48 Gene

Proteins for KRT18P48 Gene

Post-translational modifications for KRT18P48 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P48 Gene

Domains & Families for KRT18P48 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT18P48 Gene

Function for KRT18P48 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P48 Gene

Localization for KRT18P48 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT18P48 Gene

Pathways & Interactions for KRT18P48 Gene

SuperPathways for KRT18P48 Gene

No Data Available

Interacting Proteins for KRT18P48 Gene

Gene Ontology (GO) - Biological Process for KRT18P48 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT18P48 Gene

Drugs & Compounds for KRT18P48 Gene

No Compound Related Data Available

Transcripts for KRT18P48 Gene

mRNA/cDNA for KRT18P48 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P48 Gene

No ASD Table

Relevant External Links for KRT18P48 Gene

GeneLoc Exon Structure for
KRT18P48
ECgene alternative splicing isoforms for
KRT18P48

Expression for KRT18P48 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT18P48 Gene

mRNA differential expression in normal tissues according to GTEx for KRT18P48 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x6.2), Brain - Cerebellum (x4.9), and Brain - Nucleus accumbens (basal ganglia) (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of KRT18P48 Gene:

KRT18P48
genes like me logo Genes that share expression patterns with KRT18P48: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P48 Gene

Orthologs for KRT18P48 Gene

Evolution for KRT18P48 Gene

ENSEMBL:
Gene Tree for KRT18P48 (if available)
TreeFam:
Gene Tree for KRT18P48 (if available)

No data available for Orthologs for KRT18P48 Gene

Paralogs for KRT18P48 Gene

No data available for Paralogs for KRT18P48 Gene

Variants for KRT18P48 Gene

Additional Variant Information for KRT18P48 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P48

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P48 Gene

Disorders for KRT18P48 Gene

Additional Disease Information for KRT18P48

Genetic Association Database
(GAD)

No disorders were found for KRT18P48 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P48 Gene

Publications for KRT18P48 Gene

  1. Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. (PMID: 20581827) Voight BF … GIANT Consortium (Nature genetics 2010) 44 58

Products for KRT18P48 Gene

Sources for KRT18P48 Gene

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