Aliases for KRT18P38 Gene

Aliases for KRT18P38 Gene

  • Keratin 18 Pseudogene 38 2 3 5

External Ids for KRT18P38 Gene

Summaries for KRT18P38 Gene

GeneCards Summary for KRT18P38 Gene

KRT18P38 (Keratin 18 Pseudogene 38) is a Pseudogene.

Additional gene information for KRT18P38 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT18P38 Gene

Genomics for KRT18P38 Gene

GeneHancer (GH) Regulatory Elements for KRT18P38 Gene

Promoters and enhancers for KRT18P38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J019567 Enhancer 0.4 dbSUPER 7.6 -42.0 -41986 6.5 FOXA2 FOXA1 ATF2 KRT18P38 ENSG00000228412 piR-31534-582 piR-30444-268
GH06J019586 Enhancer 0.3 dbSUPER 5.5 -24.5 -24476 3.7 EZH2 KRT18P38 piR-31534-582 ENSG00000228412
GH06J019601 Enhancer 0.5 Ensembl dbSUPER 0.4 -9.8 -9838 0.2 MNT PKNOX1 KRT18P38 piR-31534-582 ENSG00000228412
GH06J019604 Enhancer 0.2 dbSUPER 0.4 -7.0 -6980 1.5 UQCRFS1P3 RNU6-801P KRT18P38 piR-31534-582 ENSG00000228412
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT18P38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRT18P38 Gene

Genomic Locations for KRT18P38 Gene
chr6:19,612,739-19,614,090
(GRCh38/hg38)
Size:
1,352 bases
Orientation:
Plus strand
chr6:19,612,919-19,614,321
(GRCh37/hg19)
Size:
1,403 bases
Orientation:
Plus strand

Genomic View for KRT18P38 Gene

Genes around KRT18P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P38 Gene

Proteins for KRT18P38 Gene

Post-translational modifications for KRT18P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P38 Gene

Domains & Families for KRT18P38 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT18P38 Gene

Function for KRT18P38 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P38 Gene

Localization for KRT18P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT18P38 Gene

Pathways & Interactions for KRT18P38 Gene

PathCards logo

SuperPathways for KRT18P38 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for KRT18P38 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT18P38 Gene

Drugs & Compounds for KRT18P38 Gene

No Compound Related Data Available

Transcripts for KRT18P38 Gene

mRNA/cDNA for KRT18P38 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P38 Gene

No ASD Table

Relevant External Links for KRT18P38 Gene

GeneLoc Exon Structure for
KRT18P38

Expression for KRT18P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT18P38 Gene

genes like me logo Genes that share expression patterns with KRT18P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P38 Gene

Orthologs for KRT18P38 Gene

Evolution for KRT18P38 Gene

ENSEMBL:
Gene Tree for KRT18P38 (if available)
TreeFam:
Gene Tree for KRT18P38 (if available)

No data available for Orthologs for KRT18P38 Gene

Paralogs for KRT18P38 Gene

No data available for Paralogs for KRT18P38 Gene

Variants for KRT18P38 Gene

Additional Variant Information for KRT18P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P38 Gene

Disorders for KRT18P38 Gene

Additional Disease Information for KRT18P38

Genetic Association Database
(GAD)

No disorders were found for KRT18P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P38 Gene

Publications for KRT18P38 Gene

  1. A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose. (PMID: 19875614) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Diabetes 2010) 41 54
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41 54

No data available for Mastermind for KRT18P38 Gene

Products for KRT18P38 Gene

Sources for KRT18P38 Gene