Aliases for KRT18P28 Gene

Aliases for KRT18P28 Gene

  • Keratin 18 Pseudogene 28 2 3 5
  • KRT18P28 5

External Ids for KRT18P28 Gene

Previous GeneCards Identifiers for KRT18P28 Gene

  • GC01M181195
  • GC01M182929
  • GC01M154164

Summaries for KRT18P28 Gene

GeneCards Summary for KRT18P28 Gene

KRT18P28 (Keratin 18 Pseudogene 28) is a Pseudogene.

Additional gene information for KRT18P28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT18P28 Gene

Genomics for KRT18P28 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KRT18P28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J182789 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 4.8 +169.9 169911 3.4 TBP SIX5 NR2C1 MNT IKZF1 SMAD5 ETS1 IRF2 HES1 MBD2 NPL DHX9 SMG7-AS1 KRT18P28 LAMC1-AS1 HSALNG0008944 MN309020
GH01J182793 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE 6.5 +165.3 165310 2.5 MNT IKZF1 IRF2 HES1 BHLHE40 ZNF395 GABPA MAFF ELF1 ZEB2 HSALNG0008944 DHX9 GLUL KRT18P28 RNASEL NPL MN309020
GH01J182955 Enhancer 0.7 Ensembl ENCODE 7.6 +4.3 4280 1.9 MAFF ZNF146 MAFK NR2F1 ZMYM3 BHLHE40 CEBPB FOS KDM1A ENSG00000226570 LOC100271717 KRT18P28 SHCBP1L LAMC1
GH01J182893 Enhancer 0.5 Ensembl 7.2 +67.0 66976 0.8 CEBPB EP300 USF2 NR2F1 NFIC KRT18P28 lnc-DHX9-1 MN298114-011 DHX9 SHCBP1L
GH01J182962 Enhancer 0.9 ENCODE 0.7 -2.3 -2314 1.2 SP1 ZBTB10 DEK ZNF217 POLR2A CTCF CEBPB SIN3A REST CUX1 LAMC2 KRT18P28 SHCBP1L HSALNG0008954 LAMC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT18P28 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT18P28 Gene

Latest Assembly
chr1:182,959,019-182,960,412
(GRCh38/hg38)
Size:
1,394 bases
Orientation:
Minus strand

Previous Assembly
chr1:182,928,154-182,929,547
(GRCh37/hg19 by Entrez Gene)
Size:
1,394 bases
Orientation:
Minus strand

chr1:182,928,209-182,929,540
(GRCh37/hg19 by Ensembl)
Size:
1,332 bases
Orientation:
Minus strand

Genomic View for KRT18P28 Gene

Genes around KRT18P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT18P28 Gene

Proteins for KRT18P28 Gene

Post-translational modifications for KRT18P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P28 Gene

Domains & Families for KRT18P28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT18P28 Gene

Function for KRT18P28 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P28 Gene

Localization for KRT18P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT18P28 Gene

Pathways & Interactions for KRT18P28 Gene

PathCards logo

SuperPathways for KRT18P28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT18P28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT18P28 Gene

Drugs & Compounds for KRT18P28 Gene

No Compound Related Data Available

Transcripts for KRT18P28 Gene

mRNA/cDNA for KRT18P28 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P28 Gene

No ASD Table

Relevant External Links for KRT18P28 Gene

GeneLoc Exon Structure for
KRT18P28

Expression for KRT18P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT18P28 Gene

mRNA expression in normal human tissues for KRT18P28 Gene
genes like me logo Genes that share expression patterns with KRT18P28: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P28 Gene

Orthologs for KRT18P28 Gene

Evolution for KRT18P28 Gene

ENSEMBL:
Gene Tree for KRT18P28 (if available)
TreeFam:
Gene Tree for KRT18P28 (if available)

No data available for Orthologs for KRT18P28 Gene

Paralogs for KRT18P28 Gene

No data available for Paralogs for KRT18P28 Gene

Variants for KRT18P28 Gene

Additional Variant Information for KRT18P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P28 Gene

Disorders for KRT18P28 Gene

No disorders were found for KRT18P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT18P28 Gene

Publications for KRT18P28 Gene

No publications were found for KRT18P28 Gene.

Products for KRT18P28 Gene

Sources for KRT18P28 Gene