KRT18P1 Gene (Pseudogene)

Keratin 18 Pseudogene 1

GC06M028969
GIFtS:
8
See more...

Aliases for KRT18P1 Gene

Aliases for KRT18P1 Gene

  • Keratin 18 Pseudogene 1 2 3 5
  • DJ25J6.3 2 3
  • KRT18P1 5

External Ids for KRT18P1 Gene

Previous GeneCards Identifiers for KRT18P1 Gene

  • GC06U990072
  • GC06M028707
  • GC06M029044
  • GC06Mc29081
  • GC06M028937
  • GC06M028744
  • GC06Mj28934

Summaries for KRT18P1 Gene

GeneCards Summary for KRT18P1 Gene

KRT18P1 (Keratin 18 Pseudogene 1) is a Pseudogene.

Additional gene information for KRT18P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT18P1 Gene

Genomics for KRT18P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for KRT18P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J028960 Enhancer 1.1 Ensembl dbSUPER 0.4 +9.4 9405 1.4 RFX1 LEF1 IKZF1 JUND DDX20 MTA2 PHF21A ZIC2 PKNOX1 ZNF24 piR-33303-146 TRIM27 ZFP57 ENSG00000230521 LINC01556 KRT18P1 ZNF311 RF00017-5395
GH06J028973 Enhancer 0.6 dbSUPER 0.7 -4.3 -4303 2 MTA1 HDAC1 ZNF766 HMBOX1 CTBP1 ZNF316 ZNF592 ZNF395 ZFP91 ID3 TRIM27 ZNF603P OR2B8P HLA-A KRT18P1 RN7SL471P lnc-OR2J1-14 ZNF311 RF00017-5395
GH06J028958 Enhancer 0.6 dbSUPER 0.4 +11.0 11004 1 POLR2A NFRKB BCOR SMAD5 SUPT5H SREBF1 PRDM10 THRAP3 NFATC3 ZBTB33 piR-33303-146 TRIM27 ZFP57 HCG15 ENSG00000244349 ENSG00000230521 ZSCAN31 KRT18P1 ZNF311 RF00017-5395
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT18P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT18P1 Gene

Genomic Locations for KRT18P1 Gene
chr6:28,969,072-28,970,467
(GRCh38/hg38)
Size:
1,396 bases
Orientation:
Minus strand
chr6:28,936,847-28,938,244
(GRCh37/hg19)
Size:
1,398 bases
Orientation:
Minus strand

Genomic View for KRT18P1 Gene

Genes around KRT18P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT18P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT18P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for KRT18P1 Gene

Proteins for KRT18P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for KRT18P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT18P1 Gene

Domains & Families for KRT18P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT18P1 Gene

Function for KRT18P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for KRT18P1 Gene

GENATLAS Biochemistry:
keratin 18,type I-related sequence 6

Phenotypes From GWAS Catalog for KRT18P1 Gene

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT18P1 Gene

Localization for KRT18P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT18P1 Gene

Pathways & Interactions for KRT18P1 Gene

PathCards logo

SuperPathways for KRT18P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT18P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT18P1 Gene

Drugs & Compounds for KRT18P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for KRT18P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for KRT18P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT18P1 Gene

No ASD Table

Relevant External Links for KRT18P1 Gene

GeneLoc Exon Structure for
KRT18P1

Expression for KRT18P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT18P1 Gene

mRNA expression in normal human tissues for KRT18P1 Gene
mRNA expression by GTEx for KRT18P1 Gene

mRNA differential expression in normal tissues according to GTEx for KRT18P1 Gene

This gene is overexpressed in Testis (x40.3) and Bladder (x12.7).
genes like me logo Genes that share expression patterns with KRT18P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT18P1 Gene

Orthologs for KRT18P1 Gene

Evolution for KRT18P1 Gene

ENSEMBL:
Gene Tree for KRT18P1 (if available)
TreeFam:
Gene Tree for KRT18P1 (if available)

No data available for Orthologs for KRT18P1 Gene

Paralogs for KRT18P1 Gene

No data available for Paralogs for KRT18P1 Gene

Variants for KRT18P1 Gene

Additional Variant Information for KRT18P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT18P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT18P1 Gene

Disorders for KRT18P1 Gene

Additional Disease Information for KRT18P1

Genetic Association Database
(GAD)

No disorders were found for KRT18P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT18P1 Gene

Publications for KRT18P1 Gene

  1. Genes in a 220-kb region spanning the TNF cluster in human MHC. (PMID: 8824804) Nalabolu SR … Weissman SM (Genomics 1996) 2 3

ExternalLinks

View latest publications for KRT18P1 gene in Mastermind

Products for KRT18P1 Gene

Sources for KRT18P1 Gene