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KRT17P1 Gene(Pseudogene)

Keratin 17 Pseudogene 1

GCID:
GC17M016840
GIFtS:
14
Genes Participants
UDN Logo

Aliases for KRT17P1 Gene

Aliases for KRT17P1 Gene

  • Keratin 17 Pseudogene 1 2 3 5

External Ids for KRT17P1 Gene

Previous GeneCards Identifiers for KRT17P1 Gene

  • GC00U990190
  • GC17U900839
  • GC17M016684
  • GC17M016744

Summaries for KRT17P1 Gene

GeneCards Summary for KRT17P1 Gene

KRT17P1 (Keratin 17 Pseudogene 1) is a Pseudogene.

Additional gene information for KRT17P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT17P1 Gene

Genomics for KRT17P1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for KRT17P1 Gene

Promoters and enhancers for KRT17P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17I016845 Enhancer 0.2 Ensembl 550.8 +0.2 235 0.2 KRT17P1 GC17P016836 GC17P016838 GC17P016839 GC17P016842 PIR32192
GH17I016835 Enhancer 0.2 ENCODE 0.4 +9.9 9862 1.4 GC17P016836 GC17P016838 GC17P016839 GC17P016842 PIR32192 KRT17P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KRT17P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRT17P1 Gene

Genomic Locations for KRT17P1 Gene
chr17:16,840,743-16,845,936
(GRCh38/hg38)
Size:
5,194 bases
Orientation:
Minus strand
chr17:16,744,057-16,749,197
(GRCh37/hg19)

Genomic View for KRT17P1 Gene

Genes around KRT17P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT17P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT17P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for KRT17P1 Gene

Proteins for KRT17P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Protein Expression for KRT17P1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for KRT17P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT17P1 Gene

Domains & Families for KRT17P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT17P1 Gene

Function for KRT17P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes for KRT17P1 Gene

GenomeRNAi human phenotypes for KRT17P1:
genes like me logo Genes that share phenotypes with KRT17P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT17P1 Gene

Localization for KRT17P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT17P1 Gene

Pathways & Interactions for KRT17P1 Gene

SuperPathways for KRT17P1 Gene

PathCards logo More details on SuperPathways for KRT17P1
No Data Available

Interacting Proteins for KRT17P1 Gene

Gene Ontology (GO) - Biological Process for KRT17P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KRT17P1 Gene

Drugs & Compounds for KRT17P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for KRT17P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for KRT17P1 Gene

(1) REFSEQ mRNAs :
(20) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT17P1 Gene

No ASD Table

Relevant External Links for KRT17P1 Gene

GeneLoc Exon Structure for
KRT17P1
ECgene alternative splicing isoforms for
KRT17P1

Expression for KRT17P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT17P1 Gene

mRNA expression in normal human tissues for KRT17P1 Gene
mRNA expression by GTEx for KRT17P1 Gene

mRNA differential expression in normal tissues according to GTEx for KRT17P1 Gene

This gene is overexpressed in Brain - Cortex (x16.2), Brain - Frontal Cortex (BA9) (x10.1), Brain - Anterior cingulate cortex (BA24) (x4.3), and Brain - Hippocampus (x4.2).

Protein differential expression in normal tissues from HIPED for KRT17P1 Gene

This gene is overexpressed in Skin (37.1), Brain (11.2), Heart (10.2), and Saliva (7.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for KRT17P1 Gene



Protein tissue co-expression partners for KRT17P1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of KRT17P1 Gene:

KRT17P1
genes like me logo Genes that share expression patterns with KRT17P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT17P1 Gene

Orthologs for KRT17P1 Gene

Evolution for KRT17P1 Gene

ENSEMBL:
Gene Tree for KRT17P1 (if available)
TreeFam:
Gene Tree for KRT17P1 (if available)

No data available for Orthologs for KRT17P1 Gene

Paralogs for KRT17P1 Gene

No data available for Paralogs for KRT17P1 Gene

Variants for KRT17P1 Gene

Additional Variant Information for KRT17P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT17P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT17P1 Gene

Disorders for KRT17P1 Gene

No disorders were found for KRT17P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT17P1 Gene

Publications for KRT17P1 Gene

  1. Characterization of the human gene encoding cytokeratin 17 and its expression pattern. (PMID: 1281771) Troyanovsky SM … Franke WW (European journal of cell biology 1992) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (PMID: 11997339) Park SS … Lupski JR (Genome research 2002) 3 58

Products for KRT17P1 Gene

Sources for KRT17P1 Gene

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