Aliases for KRT16P6 Gene

Aliases for KRT16P6 Gene

  • Keratin 16 Pseudogene 6 2 3 5
  • Keratin 14 Pseudogene 3
  • Keratin Pseudogene 3
  • KRT16P6 5

External Ids for KRT16P6 Gene

Summaries for KRT16P6 Gene

GeneCards Summary for KRT16P6 Gene

KRT16P6 (Keratin 16 Pseudogene 6) is a Pseudogene.

Additional gene information for KRT16P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KRT16P6 Gene

Genomics for KRT16P6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KRT16P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J016819 Enhancer 0.2 Ensembl 256.5 +1.3 1278 3.4 KRT16P6 HSALNG0114891 LOC105371552 lnc-TNFRSF13B-4 LOC105371553 ENSG00000266302 TNFRSF13B
GH17J016823 Enhancer 0.2 Ensembl 250.7 -1.5 -1519 0.6 HSALNG0114891 KRT16P6 LOC105371552 lnc-TNFRSF13B-4 piR-61101-265 ENSG00000266302 TNFRSF13B
GH17J016689 Promoter 1.1 EPDnew Ensembl 11.7 +132.2 132178 1.6 ZNF217 REST CTCF TRIM22 SMARCA5 MLLT1 NRF1 ZBTB33 RLF CREB1 ENSG00000266302 RNU6-405P RF00026-419 piR-34106-001 piR-43834-001 CCDC144A KRT16P6 TNFRSF13B
GH17J016749 Promoter/Enhancer 0.8 EPDnew Ensembl 9.7 +71.9 71892 3.2 CTCF TRIM22 ZNF316 MAZ ZNF211 ZNF654 CCDC144A RAI1 KRT16P6 NEK4P2 KRT17P1 UPF3AP1 piR-56580-011 ENSG00000266302 TNFRSF13B
GH17J016535 Promoter/Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas 4.6 +286.4 286435 2.5 ZBTB10 SP1 MXD4 SIX5 NR2C1 ETS1 MBD2 ZNF217 POLR2A CTCF LOC105371554 lnc-TRPV2-4 lnc-ZNF287-1 MPRIP-AS1 LRRC75A PIGL NCOR1 ZNF287 KRT16P6 CCDC144A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KRT16P6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KRT16P6 Gene

Latest Assembly
chr17:16,817,983-16,822,579
(GRCh38/hg38)
Size:
4,597 bases
Orientation:
Minus strand

Previous Assembly
chr17:16,721,297-16,725,867
(GRCh37/hg19 by Entrez Gene)
Size:
4,571 bases
Orientation:
Minus strand

chr17:16,721,297-16,725,893
(GRCh37/hg19 by Ensembl)
Size:
4,597 bases
Orientation:
Minus strand

Genomic View for KRT16P6 Gene

Genes around KRT16P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT16P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT16P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT16P6 Gene

Proteins for KRT16P6 Gene

Post-translational modifications for KRT16P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT16P6 Gene

Domains & Families for KRT16P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KRT16P6 Gene

Function for KRT16P6 Gene

Phenotypes From GWAS Catalog for KRT16P6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT16P6 Gene

Localization for KRT16P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT16P6 Gene

Pathways & Interactions for KRT16P6 Gene

PathCards logo

SuperPathways for KRT16P6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT16P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KRT16P6 Gene

Drugs & Compounds for KRT16P6 Gene

No Compound Related Data Available

Transcripts for KRT16P6 Gene

mRNA/cDNA for KRT16P6 Gene

4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KRT16P6 Gene

No ASD Table

Relevant External Links for KRT16P6 Gene

GeneLoc Exon Structure for
KRT16P6

Expression for KRT16P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KRT16P6 Gene

genes like me logo Genes that share expression patterns with KRT16P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT16P6 Gene

Orthologs for KRT16P6 Gene

Evolution for KRT16P6 Gene

ENSEMBL:
Gene Tree for KRT16P6 (if available)
TreeFam:
Gene Tree for KRT16P6 (if available)

No data available for Orthologs for KRT16P6 Gene

Paralogs for KRT16P6 Gene

No data available for Paralogs for KRT16P6 Gene

Variants for KRT16P6 Gene

Additional Variant Information for KRT16P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KRT16P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KRT16P6 Gene

Disorders for KRT16P6 Gene

No disorders were found for KRT16P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KRT16P6 Gene

Publications for KRT16P6 Gene

  1. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (PMID: 11997339) Park SS … Lupski JR (Genome research 2002) 3

Products for KRT16P6 Gene

Sources for KRT16P6 Gene