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Aliases for KRT16P3 Gene

Aliases for KRT16P3 Gene

  • Keratin 16 Pseudogene 3 2 3 5
  • Cytokeratin, Smith Magenis Syndrome Chromosome Region 2

External Ids for KRT16P3 Gene

Previous HGNC Symbols for KRT16P3 Gene


Previous GeneCards Identifiers for KRT16P3 Gene

  • GC17M020404
  • GC17M019634

Summaries for KRT16P3 Gene

GeneCards Summary for KRT16P3 Gene

KRT16P3 (Keratin 16 Pseudogene 3) is a Pseudogene.

Additional gene information for KRT16P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT16P3 Gene

Genomics for KRT16P3 Gene

GeneHancer (GH) Regulatory Elements for KRT16P3 Gene

Promoters and enhancers for KRT16P3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I019976 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 8.7 +534.4 534437 2.8 CLOCK FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 AKAP10 ENSG00000261033 FAM83G KRT16P3 PIR61765
GH17I020466 Promoter/Enhancer 1 EPDnew Ensembl 8.1 +45.1 45057 1.4 SMARCA5 IKZF1 DPF2 ZIC2 LGALS9B KRT16P3 GC17M020454
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KRT16P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KRT16P3 Gene

Genomic Locations for KRT16P3 Gene
10,845 bases
Minus strand

Genomic View for KRT16P3 Gene

Genes around KRT16P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KRT16P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KRT16P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT16P3 Gene

Proteins for KRT16P3 Gene

Post-translational modifications for KRT16P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KRT16P3 Gene

Domains & Families for KRT16P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KRT16P3 Gene

Function for KRT16P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KRT16P3 Gene

Localization for KRT16P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KRT16P3 Gene

Pathways & Interactions for KRT16P3 Gene

SuperPathways for KRT16P3 Gene

No Data Available

Interacting Proteins for KRT16P3 Gene

Gene Ontology (GO) - Biological Process for KRT16P3 Gene


No data available for Pathways by source and SIGNOR curated interactions for KRT16P3 Gene

Drugs & Compounds for KRT16P3 Gene

No Compound Related Data Available

Transcripts for KRT16P3 Gene

mRNA/cDNA for KRT16P3 Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KRT16P3 Gene

Keratin 16 pseudogene 3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KRT16P3 Gene

No ASD Table

Relevant External Links for KRT16P3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KRT16P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KRT16P3 Gene

mRNA differential expression in normal tissues according to GTEx for KRT16P3 Gene

This gene is overexpressed in Esophagus - Mucosa (x27.7), Vagina (x7.0), and Cervix - Ectocervix (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of KRT16P3 Gene:


SOURCE GeneReport for Unigene cluster for KRT16P3 Gene:

genes like me logo Genes that share expression patterns with KRT16P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KRT16P3 Gene

Orthologs for KRT16P3 Gene

Evolution for KRT16P3 Gene

Gene Tree for KRT16P3 (if available)
Gene Tree for KRT16P3 (if available)

No data available for Orthologs for KRT16P3 Gene

Paralogs for KRT16P3 Gene

No data available for Paralogs for KRT16P3 Gene

Variants for KRT16P3 Gene

Sequence variations from dbSNP and Humsavar for KRT16P3 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000120723 -- 20,501,583(-) G/C non_coding_transcript_variant
rs1000637559 -- 20,503,225(-) G/A non_coding_transcript_variant
rs1001059266 -- 20,504,397(-) G/A non_coding_transcript_variant
rs1002155470 -- 20,505,468(-) G/C upstream_transcript_variant
rs1004900610 -- 20,503,111(-) C/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for KRT16P3 Gene

Variant ID Type Subtype PubMed ID
nsv978389 CNV duplication 23825009
nsv953848 CNV deletion 24416366
nsv9507 CNV gain+loss 18304495
nsv833399 CNV loss 17160897
nsv833397 CNV loss 17160897
nsv827916 CNV gain 20364138
nsv574595 CNV loss 21841781
nsv574589 CNV loss 21841781
nsv574581 CNV loss 21841781
nsv521025 CNV gain 19592680
nsv520772 CNV loss 19592680
nsv471495 CNV gain 19718026
nsv469852 CNV gain 16826518
nsv428338 CNV gain 18775914
nsv1066679 CNV gain 25217958
nsv1066226 CNV gain 25217958
nsv1059504 CNV gain 25217958
nsv1055600 CNV loss 25217958
esv3640204 CNV gain 21293372
esv3640203 CNV loss 21293372
esv2758680 CNV gain 17122850
esv23447 CNV gain+loss 19812545
dgv3121n100 CNV loss 25217958

Additional Variant Information for KRT16P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KRT16P3 Gene

Disorders for KRT16P3 Gene

Additional Disease Information for KRT16P3

No disorders were found for KRT16P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KRT16P3 Gene

Publications for KRT16P3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for KRT16P3 Gene

Sources for KRT16P3 Gene

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