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Aliases for KNOP1P2 Gene

Subcategory (RNA class) for KNOP1P2 Gene

antisense

Aliases for KNOP1P2 Gene

  • Lysine Rich Nucleolar Protein 1 Pseudogene 2 2 3 5

External Ids for KNOP1P2 Gene

ORGUL Members for KNOP1P2 Gene

Previous GeneCards Identifiers for KNOP1P2 Gene

  • GC12M046275

Summaries for KNOP1P2 Gene

GeneCards Summary for KNOP1P2 Gene

KNOP1P2 (Lysine Rich Nucleolar Protein 1 Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for KNOP1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KNOP1P2 Gene

Genomics for KNOP1P2 Gene

GeneHancer (GH) Regulatory Elements for KNOP1P2 Gene

Promoters and enhancers for KNOP1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J046263 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 41.5 -385.0 -385017 8.5 CEBPB ZBTB33 DACH1 SPI1 SP1 ZKSCAN8 ZFX IRF5 MLLT1 GTF2F1 SLC38A1 LOC105378248 ARID2 KNOP1P2 SCAF11 ENSG00000258096 ENSG00000257261 ENSG00000239397 ENSG00000273015 SLC38A2
GH12J046364 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 35.2 -487.3 -487316 11 CEBPB ZBTB33 SPI1 MTA3 NR2F6 SP1 MNT CBFA2T2 IRF5 HCFC1 ENSG00000258096 SLC38A2 ARID2 SCAF11 KNOP1P2 ENSG00000273015 SLC38A1 ENSG00000257261 LOC102723757 GC12P046358
GH12J046376 Enhancer 0.9 dbSUPER 35.5 -496.6 -496556 4.9 SP1 L3MBTL2 PRDM1 SMARCA4 ZNF404 MZF1 ZNF680 ZNF560 RXRA ZBTB8A ARID2 KNOP1P2 SCAF11 SLC38A2 ENSG00000258096 ENSG00000273015 ENSG00000257261 LOC100288798
GH12J044948 Enhancer 1 ENCODE 28 +933.4 933395 0.2 ZBTB33 SMARCE1 MLLT1 GTF2F1 L3MBTL2 TEAD4 SMARCA4 ZSCAN21 TRIM24 ELF1 ARID2 KNOP1P2 NELL2 GC12M044982
GH12J045725 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.2 +152.6 152585 9.4 FOXK2 CEBPB ZBTB33 DACH1 SPI1 NR2F6 SP1 MNT SMARCE1 ZFX ARID2 ENSG00000273015 LINC00938 ENSG00000258096 KNOP1P2 SCAF11 ENSG00000278475 GC12P045311
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KNOP1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KNOP1P2 Gene

Genomic Locations for KNOP1P2 Gene
chr12:45,880,950-45,882,268
(GRCh38/hg38)
Size:
1,319 bases
Orientation:
Minus strand
chr12:46,274,733-46,276,051
(GRCh37/hg19)
Size:
1,319 bases
Orientation:
Minus strand

Genomic View for KNOP1P2 Gene

Genes around KNOP1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KNOP1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KNOP1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KNOP1P2 Gene

Proteins for KNOP1P2 Gene

Post-translational modifications for KNOP1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KNOP1P2 Gene

Domains & Families for KNOP1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KNOP1P2 Gene

Function for KNOP1P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KNOP1P2 Gene

Localization for KNOP1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KNOP1P2 Gene

Pathways & Interactions for KNOP1P2 Gene

SuperPathways for KNOP1P2 Gene

No Data Available

Interacting Proteins for KNOP1P2 Gene

Gene Ontology (GO) - Biological Process for KNOP1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KNOP1P2 Gene

Drugs & Compounds for KNOP1P2 Gene

No Compound Related Data Available

Transcripts for KNOP1P2 Gene

mRNA/cDNA for KNOP1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KNOP1P2 Gene

No ASD Table

Relevant External Links for KNOP1P2 Gene

GeneLoc Exon Structure for
KNOP1P2
ECgene alternative splicing isoforms for
KNOP1P2

Expression for KNOP1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KNOP1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of KNOP1P2 Gene:

KNOP1P2
genes like me logo Genes that share expression patterns with KNOP1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KNOP1P2 Gene

Orthologs for KNOP1P2 Gene

Evolution for KNOP1P2 Gene

ENSEMBL:
Gene Tree for KNOP1P2 (if available)
TreeFam:
Gene Tree for KNOP1P2 (if available)

No data available for Orthologs for KNOP1P2 Gene

Paralogs for KNOP1P2 Gene

No data available for Paralogs for KNOP1P2 Gene

Variants for KNOP1P2 Gene

Additional Variant Information for KNOP1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KNOP1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KNOP1P2 Gene

Disorders for KNOP1P2 Gene

No disorders were found for KNOP1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KNOP1P2 Gene

Publications for KNOP1P2 Gene

No publications were found for KNOP1P2 Gene.

Products for KNOP1P2 Gene

Sources for KNOP1P2 Gene

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