Aliases for KMT2C Gene
Aliases for KMT2C Gene
External Ids for KMT2C Gene
- HGNC: 13726
- Entrez Gene: 58508
- Ensembl: ENSG00000055609
- OMIM: 606833
- UniProtKB: Q8NEZ4
Previous HGNC Symbols for KMT2C Gene
- MLL3
Previous GeneCards Identifiers for KMT2C Gene
- GC07M151835
Summaries for KMT2C Gene
-
This gene is a member of the myeloid/lymphoid or mixed-lineage leukemia (MLL) family and encodes a nuclear protein with an AT hook DNA-binding domain, a DHHC-type zinc finger, six PHD-type zinc fingers, a SET domain, a post-SET domain and a RING-type zinc finger. This protein is a member of the ASC-2/NCOA6 complex (ASCOM), which possesses histone methylation activity and is involved in transcriptional coactivation. [provided by RefSeq, Jul 2008]
GeneCards Summary for KMT2C Gene
KMT2C (Lysine Methyltransferase 2C) is a Protein Coding gene. Diseases associated with KMT2C include Kleefstra Syndrome 2 and Kleefstra Syndrome Due To A Point Mutation. Among its related pathways are Chromatin organization and PKMTs methylate histone lysines. Gene Ontology (GO) annotations related to this gene include histone methyltransferase activity (H3-K4 specific). An important paralog of this gene is KMT2D.
UniProtKB/Swiss-Prot for KMT2C Gene
-
Histone methyltransferase. Methylates Lys-4 of histone H3. H3 Lys-4 methylation represents a specific tag for epigenetic transcriptional activation. Central component of the MLL2/3 complex, a coactivator complex of nuclear receptors, involved in transcriptional coactivation. KMT2C/MLL3 may be a catalytic subunit of this complex. May be involved in leukemogenesis and developmental disorder.
Additional gene information for KMT2C Gene
- Monarch Initiative
- Search for KMT2C at DataMed
- Search for KMT2C at HumanCyc
No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KMT2C Gene
Genomics for KMT2C Gene
GeneHancer (GH) Regulatory Elements for KMT2C Gene
Promoters and enhancers for KMT2C Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around KMT2C on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for KMT2C Gene
Genomic Locations for KMT2C Gene
- chr7:152,134,922-152,436,638
- (GRCh38/hg38)
- Size:
- 301,717 bases
- Orientation:
- Minus strand
- chr7:151,832,010-152,133,090
- (GRCh37/hg19)
- Size:
- 301,081 bases
- Orientation:
- Minus strand
Genomic View for KMT2C Gene
Genes around KMT2C on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7q36.1 by Entrez Gene
- 7q36.1 by HGNC
- 7q36.1 by Ensembl
KMT2C Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for KMT2C Gene
Proteins for KMT2C Gene
-
Protein details for KMT2C Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q8NEZ4-KMT2C_HUMAN
- Recommended name:
- Histone-lysine N-methyltransferase 2C
- Protein Accession:
- Q8NEZ4
- Q8NC02
- Q8NDF6
- Q9H9P4
- Q9NR13
- Q9P222
- Q9UDR7
Protein attributes for KMT2C Gene
- Size:
- 4911 amino acids
- Molecular mass:
- 541370 Da
- Quaternary structure:
-
- Component of the MLL2/3 complex (also named ASCOM complex), at least composed of KMT2D/MLL2 or KMT2C/MLL3, ASH2L, RBBP5, WDR5, NCOA6, DPY30, KDM6A, PAXIP1/PTIP, PAGR1 and alpha- and beta-tubulin. Interacts with histone H3.
- Miscellaneous:
-
- Found in a critical region of chromosome 7, which is commonly deleted in malignant myeloid disorders. Partial duplication of the KMT2C gene are found in the juxtacentromeric region of chromosomes 1, 2, 13 and 21. Juxtacentromeric reshuffling of the KMT2C gene has generated the BAGE genes.
Three dimensional structures from OCA and Proteopedia for KMT2C Gene
Protein Expression for KMT2C Gene
Post-translational modifications for KMT2C Gene
Other Protein References for KMT2C Gene
- ENSEMBL proteins:
- REFSEQ proteins:
-
- XP_011514758.1
- XP_005250082.1
- XP_016867978.1
- NP_733751.2
- XP_016867975.1
- XP_005250088.1
- XP_016867976.1
- XP_006716142.1
- XP_016867973.1
- XP_006716141.1
- XP_005250085.1
- XP_005250083.1
- XP_016867974.1
- XP_016867971.1
- XP_011514752.1
- XP_024302621.1
- XP_016867972.1
- XP_011514754.1
- XP_016867979.1
- XP_016867969.1
- XP_011514753.1
- XP_016867977.1
- XP_016867970.1
- XP_024302620.1
- XP_006716140.1
- XP_011514756.1
- XP_011514755.1
- XP_005250084.1
Antibody Products
- Novus Biologicals Antibodies for KMT2C
-
Abcam antibodies for KMT2C
- Invitrogen Antibodies for KMT2C
- Search GeneTex for Antibodies for KMT2C
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for KMT2C
- Origene Custom Protein Services for KMT2C
- Novus Biologicals proteins for KMT2C
- Search GeneTex for Proteins for KMT2C
-
Abcam proteins for KMT2C
Assay Products
No data available for DME Specific Peptides for KMT2C Gene
Domains & Families for KMT2C Gene
Gene Families for KMT2C Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Cancer-related genes
- Enzymes
- Plasma proteins
- Predicted intracellular proteins
Protein Domains for KMT2C Gene
Suggested Antigen Peptide Sequences for KMT2C Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q8NEZ4UniProtKB/Swiss-Prot:
KMT2C_HUMAN :- The SET domain interacts with histone H3 but not H2A, H2B and H4, and may have a H3 lysine specific methylation activity.
- Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
- Domain:
-
- The SET domain interacts with histone H3 but not H2A, H2B and H4, and may have a H3 lysine specific methylation activity.
- Family:
-
- Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
Function for KMT2C Gene
Molecular function for KMT2C Gene
- UniProtKB/Swiss-Prot Function:
- Histone methyltransferase. Methylates Lys-4 of histone H3. H3 Lys-4 methylation represents a specific tag for epigenetic transcriptional activation. Central component of the MLL2/3 complex, a coactivator complex of nuclear receptors, involved in transcriptional coactivation. KMT2C/MLL3 may be a catalytic subunit of this complex. May be involved in leukemogenesis and developmental disorder.
- UniProtKB/Swiss-Prot CatalyticActivity:
- S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].
Enzyme Numbers (IUBMB) for KMT2C Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | -- |
| GO:0003723 | RNA binding | HDA | 22658674 |
| GO:0005515 | protein binding | IPI | 12482968 |
| GO:0008168 | methyltransferase activity | IEA | -- |
| GO:0016740 | transferase activity | IEA | -- |
Phenotypes for KMT2C Gene
- MGI mutant phenotypes for KMT2C:
- inferred from 3 alleles
- GenomeRNAi human phenotypes for KMT2C:
-
- Decreased shRNA abundance (Z-score < -2)
- Effect on mitosis
- Dynamic nuclei (hole, folded or small irregular)
- Increased shRNA abundance (Z-score > 2)
- Decreased viability in esophageal squamous lineage
- Increased Nanog expression
- Decreased viability
- no effect
- Increased vaccinia virus (VACV) infection
- Resistant to vaccinia virus (VACV-A4L) infection
- Decreased IL-8 secretion
Animal Models for KMT2C Gene
- MGI Knock Outs for KMT2C:
-
- Kmt2c Kmt2c<tm1.1Jwle>
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for KMT2C
-
CRISPR Products
-
OriGene CRISPR knockouts for KMT2C
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for KMT2C
- genomics-online: gRNA clones - Search results for available KMT2C gene related products
- Applied Biological Materials CRISPR for KMT2C
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for KMT2C
- GenScript: Design CRISPR guide RNA sequences for KMT2C
miRNA for KMT2C Gene
- miRTarBase miRNAs that target KMT2C
-
- hsa-mir-335-5p (MIRT016990)
- hsa-mir-128-3p (MIRT021900)
- hsa-mir-26b-5p (MIRT028951)
- hsa-mir-940 (MIRT036615)
- hsa-mir-708-5p (MIRT037748)
- hsa-mir-106b-3p (MIRT038581)
- hsa-mir-652-3p (MIRT039471)
- hsa-mir-615-3p (MIRT040134)
- hsa-mir-484 (MIRT041865)
- hsa-mir-320a (MIRT044506)
- hsa-mir-186-5p (MIRT045225)
- hsa-mir-15b-5p (MIRT046443)
- hsa-mir-196a-5p (MIRT048165)
- hsa-mir-610 (MIRT239677)
- hsa-mir-93-3p (MIRT536429)
- hsa-mir-4663 (MIRT536430)
- hsa-mir-4632-3p (MIRT536431)
- hsa-mir-6746-3p (MIRT536432)
- hsa-mir-27b-3p (MIRT727182)
- hsa-mir-27a-3p (MIRT727183)
- hsa-mir-934 (MIRT734915)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for KMT2C
- Browse OriGene Inhibitory RNA Products For KMT2C
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for KMT2C
- genomics-online: shRNA clones - Search results for available KMT2C gene related products
Clone Products
-
OriGene ORF clones in human for KMT2C
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
-
GenScript: Next-day shipping of latest version cDNA ORF clones for KMT2C in any vector
- XM_005250027.4
- XM_005250031.4
- XM_005250025.4
- XM_005250028.4
- XM_006716079.3
- XM_006716078.3
- XM_005250026.3
- XM_006716077.3
- XM_011516456.2
- XM_011516451.2
- XM_011516454.2
- NM_170606.2
- XM_011516453.2
- XM_011516450.2
- XM_011516452.2
- XM_017012482.1
- XM_017012484.1
- XM_017012488.1
- XM_017012490.1
- XM_017012486.1
- XM_017012483.1
- XM_017012489.1
- XM_017012485.1
- XM_017012481.1
- XM_017012480.1
- XM_017012487.1
- VectorBuilder custom plasmid, inducible vectors for KMT2C
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for KMT2C
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for KMT2C
- genomics-online: cdna clones - Search results for available KMT2C gene related products
- orf clones - Search results for available KMT2C gene related products
- Applied Biological Materials Clones for KMT2C
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for KMT2C
No data available for Phenotypes From GWAS Catalog , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for KMT2C Gene
Localization for KMT2C Gene
Subcellular locations from UniProtKB/Swiss-Prot for KMT2C Gene
- Nucleus.
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| cytosol | 2 |
- Nucleoplasm (3)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | IDA | 17500065 |
| GO:0005654 | nucleoplasm | TAS | -- |
| GO:0035097 | histone methyltransferase complex | IDA | 17500065 |
| GO:0044666 | MLL3/4 complex | IDA | 17500065 |
Pathways & Interactions for KMT2C Gene
Pathways by source for KMT2C Gene
1 GeneTex pathway for KMT2C Gene
2 BioSystems pathways for KMT2C Gene
6 Reactome pathways for KMT2C Gene
1 KEGG pathway for KMT2C Gene
Interacting Proteins for KMT2C Gene
Selected Interacting proteins:
ENSP00000262189
Q8NEZ4-KMT2C_HUMAN
for KMT2C Gene via
STRING
MINT
UniProtKB
IID
GPS-Prot Interaction Network for KMT2C
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006325 | chromatin organization | IEA | -- |
| GO:0006351 | transcription, DNA-templated | IEA | -- |
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
| GO:0032259 | methylation | IEA | -- |
| GO:0034968 | histone lysine methylation | IEA | -- |
No data available for SIGNOR curated interactions for KMT2C Gene
Drugs & Compounds for KMT2C Gene
| Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
|---|---|---|---|---|---|---|
| Entacapone | Approved, Investigational | Pharma | COMT inhibitor, Potent COMT inhibitor; blocks alpha-synuclein aggregation | 54 | ||
| L-Lysine | Approved | Nutra | Full agonist, Agonist | 0 | ||
| s-adenosylhomocysteine | Experimental | Pharma | 0 | |||
| EPZ004777 | Pharma | DOT1L inhibitor | 0 | |||
| PFI-2 | Pharma | 0 |
| Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs | |
|---|---|---|---|---|---|---|
| s-adenosylmethionine |
|
485-80-3 |
|
(4) ApexBio Compounds for KMT2C Gene
| Compound | Action | Cas Number |
|---|---|---|
| Entacapone | COMT inhibitor | 130929-57-6 |
| EPZ004777 | DOT1L inhibitor | 1338466-77-5 |
| PFI-2 | 1627676-59-8 | |
| SGI-1027 | DNMT inhibitor | 1020149-73-8 |
Transcripts for KMT2C Gene
mRNA/cDNA for KMT2C Gene
- (29) REFSEQ mRNAs :
- (366) Selected AceView cDNA sequences:
- (13) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000262189 16862 bps (uc003wla.3)
- ENST00000424877 5874 bps (uc064jmn.1)
- ENST00000473186 12854 bps (uc064jmo.1)
- ENST00000485241 479 bps (uc064jmp.1)
- ENST00000418061 710 bps (uc064jmq.1)
CRISPR Products
-
OriGene CRISPR knockouts for KMT2C
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for KMT2C
- genomics-online: gRNA clones - Search results for available KMT2C gene related products
- Applied Biological Materials CRISPR for KMT2C
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for KMT2C
- GenScript: Design CRISPR guide RNA sequences for KMT2C
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for KMT2C
- Browse OriGene Inhibitory RNA Products For KMT2C
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for KMT2C
- genomics-online: shRNA clones - Search results for available KMT2C gene related products
Clone Products
-
OriGene ORF clones in human for KMT2C
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
-
GenScript: Next-day shipping of latest version cDNA ORF clones for KMT2C in any vector
- XM_005250027.4
- XM_005250031.4
- XM_005250025.4
- XM_005250028.4
- XM_006716079.3
- XM_006716078.3
- XM_005250026.3
- XM_006716077.3
- XM_011516456.2
- XM_011516451.2
- XM_011516454.2
- NM_170606.2
- XM_011516453.2
- XM_011516450.2
- XM_011516452.2
- XM_017012482.1
- XM_017012484.1
- XM_017012488.1
- XM_017012490.1
- XM_017012486.1
- XM_017012483.1
- XM_017012489.1
- XM_017012485.1
- XM_017012481.1
- XM_017012480.1
- XM_017012487.1
- VectorBuilder custom plasmid, inducible vectors for KMT2C
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for KMT2C
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for KMT2C
- genomics-online: cdna clones - Search results for available KMT2C gene related products
- orf clones - Search results for available KMT2C gene related products
- Applied Biological Materials Clones for KMT2C
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for KMT2C Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Heart (Cardiovascular System)
- Atrioventricular Canal Cells Atrioventricular Canal
- Outflow Tract
-
Blood (Hematopoietic System)
- pre Conventional Dendritic Cells Peripheral Blood
-
Gonad (Reproductive System)
- Testis Somatic Cells Primitive Gonad
-
Testis (Reproductive System)
- Testis Somatic Cells Primitive Gonad
-
Limb (Muscoskeletal System)
- Limb Bud Mesenchyme Cells Limb Bud
-
Mesoderm (Gastrulation Derivatives)
- Limb Bud Mesenchyme Cells Limb Bud
This gene is overexpressed in Plasma (27.4).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for KMT2C Gene
NURSA nuclear receptor signaling pathways regulating expression of KMT2C Gene:
KMT2CmRNA Expression by UniProt/SwissProt for KMT2C Gene:
Q8NEZ4-KMT2C_HUMAN
Tissue specificity:
Highly expressed in testis and ovary, followed by brain and liver. Also expressed in placenta, peripherical blood, fetal thymus, heart, lung and kidney. Within brain, expression was highest in hippocampus, caudate nucleus, and substantia nigra. Not detected in skeletal muscle and fetal liver.
Evidence on tissue expression from TISSUES for KMT2C Gene
- Nervous system(4.8)
- Liver(4.5)
- Lung(2.3)
- Intestine(2.2)
Primer Products
-
OriGene qPCR primer pairs for KMT2C
- genomics-online: primer clones - Search results for available KMT2C gene related products
Gene Expression Assay Products
No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for KMT2C Gene
Orthologs for KMT2C Gene
This gene was present in the common ancestor of animals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | MLL3 33 |
|
||
| KMT2C 34 |
|
OneToOne | |||
| dog (Canis familiaris) |
Mammalia | KMT2C 34 |
|
OneToOne | |
| MLL3 33 |
|
||||
| mouse (Mus musculus) |
Mammalia | Kmt2c 16 34 33 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Kmt2c 33 |
|
||
| cow (Bos Taurus) |
Mammalia | KMT2C 34 33 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | KMT2C 34 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | -- 34 |
|
OneToMany | |
| -- 34 |
|
OneToMany | |||
| chicken (Gallus gallus) |
Aves | MLL3 33 |
|
||
| KMT2C 34 |
|
OneToOne | |||
| lizard (Anolis carolinensis) |
Reptilia | KMT2C 34 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | kmt2c 33 |
|
||
| Str.11992 33 |
|
||||
| zebrafish (Danio rerio) |
Actinopterygii | kmt2ca 34 33 |
|
OneToMany | |
| kmt2cb 34 |
|
OneToMany | |||
| Dr.18611 33 |
|
||||
| fruit fly (Drosophila melanogaster) |
Insecta | Lpt 34 |
|
ManyToMany |
- Species where no ortholog for KMT2C was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Evolution for KMT2C Gene
- ENSEMBL:
- Gene Tree for KMT2C (if available)
- TreeFam:
- Gene Tree for KMT2C (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for KMT2C: view image
Paralogs for KMT2C Gene
(3) SIMAP similar genes for KMT2C Gene using alignment to 8 proteins:
- KMT2C_HUMAN
- C9J4Z5_HUMAN
- H0Y765_HUMAN
- H0YMU7_HUMAN
- H0YNL4_HUMAN
- H7BY37_HUMAN
- H7C212_HUMAN
- H7C2V8_HUMAN
Pseudogenes.org Pseudogenes for KMT2C Gene
Variants for KMT2C Gene
| SNP ID | Clin | Chr 07 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs587777073 | pathogenic, likely-pathogenic, KLEEFSTRA SYNDROME 2, not provided | 152,194,506(-) | G/A | coding_sequence_variant, non_coding_transcript_variant, stop_gained | |
| rs779659766 | pathogenic, KLEEFSTRA SYNDROME 2 | 152,177,903(-) | G/A/C | coding_sequence_variant, missense_variant, non_coding_transcript_variant, stop_gained | |
| VAR_036311 | A colorectal cancer sample | p.Cys347Gly | |||
| VAR_036312 | A colorectal cancer sample | p.Asp400Asn | |||
| VAR_036313 | A colorectal cancer sample | p.Leu478Trp |
Residual Variation Intolerance Score:
15.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
19.43;
98.86% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for KMT2C Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KMT2C Gene
Disorders for KMT2C Gene
(6) MalaCards diseases for KMT2C Gene - From: HGMD, OMIM, ClinVar, Orphanet, DISEASES, and GeneCards
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| kleefstra syndrome 2 |
|
|
| kleefstra syndrome due to a point mutation |
|
|
| kleefstra syndrome |
|
|
| nut midline carcinoma |
|
|
| embryoma |
|
|
Search KMT2C in MalaCards
View complete list of genes associated with diseases
UniProtKB/Swiss-Prot
KMT2C_HUMAN- Kleefstra syndrome 2 (KLEFS2) [MIM:617768]: A form of Kleefstra syndrome, an autosomal dominant disease characterized by variable mental retardation, psychomotor developmental delay, seizures, behavioral abnormalities, and facial dysmorphisms. {ECO:0000269 PubMed:22726846, ECO:0000269 PubMed:29069077}. Note=The disease is caused by mutations affecting the gene represented in this entry.
Additional Disease Information for KMT2C
No data available for Genatlas for KMT2C Gene
Publications for KMT2C Gene
- Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins. (PMID: 12482968) Goo YH … Lee JW (Molecular and cellular biology 2003) 3 4 22 58
- MLL3, a new human member of the TRX/MLL gene family, maps to 7q36, a chromosome region frequently deleted in myeloid leukaemia. (PMID: 11891048) Ruault M … De Sario A (Gene 2002) 3 4 22 58
- Novel human HALR (MLL3) gene encodes a protein homologous to ALR and to ALL-1 involved in leukemia, and maps to chromosome 7q36 associated with leukemia and developmental defects. (PMID: 11718452) Tan YC … Chow VT (Cancer detection and prevention 2001) 3 4 22 58
- Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10819331) Nagase T … Ohara O (DNA research : an international journal for rapid publication of reports on genes and genomes 2000) 2 3 4 58
- Functional convergence of histone methyltransferases EHMT1 and KMT2C involved in intellectual disability and autism spectrum disorder. (PMID: 29069077) Koemans TS … Kramer JM (PLoS genetics 2017) 3 4 58
Products for KMT2C Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for KMT2C
- Origene Custom Protein Services for KMT2C
- Origene shrna, sirna, and RNAi products in human, mouse, rat for KMT2C
- Browse OriGene Inhibitory RNA Products For KMT2C
- OriGene qPCR primer pairs for KMT2C
- OriGene CRISPR knockouts for KMT2C
- OriGene ORF clones in human for KMT2C
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For KMT2C
- GenScript: Next-day shipping of latest version cDNA ORF clones for KMT2C in any vector
- XM_005250027.4
- XM_005250031.4
- XM_005250025.4
- XM_005250028.4
- XM_006716079.3
- XM_006716078.3
- XM_005250026.3
- XM_006716077.3
- XM_011516456.2
- XM_011516451.2
- XM_011516454.2
- NM_170606.2
- XM_011516453.2
- XM_011516450.2
- XM_011516452.2
- XM_017012482.1
- XM_017012484.1
- XM_017012488.1
- XM_017012490.1
- XM_017012486.1
- XM_017012483.1
- XM_017012489.1
- XM_017012485.1
- XM_017012481.1
- XM_017012480.1
- XM_017012487.1
- GenScript Custom Purified and Recombinant Proteins Services for KMT2C
- GenScript Custom Assay Services for KMT2C
- GenScript Custom overexpressing Cell Line Services for KMT2C
- GenScript: Design CRISPR guide RNA sequences for KMT2C
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for KMT2C
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for KMT2C
- Novus Biologicals proteins for KMT2C
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Abcam antibodies for KMT2C
- Abcam proteins for KMT2C
- Find your target
- Browse Primary Antibodies
- Browse Conjugated Primary Antibodies
- Browse Secondary Antibodies
- Browse ELISA Kits
- Browse Matched Antibody Pairs
- Browse Proteins and Peptides
- Search Knockout (KO) Validated Antibodies
- Browse Monoclonal Antibodies
- Browse Recombinant Antibodies
- Cyagen custom Knockout/knockin (KOKI) mouse models for KMT2C
- VectorBuilder custom plasmid, inducible vectors for KMT2C
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for KMT2C
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available KMT2C related products ranked by validation data
- antibodies-online: Search results for available KMT2C related products ranked by validation data
- antibodies-online: Search results for available KMT2C related products ranked by validation data
- Search GeneTex for Antibodies for KMT2C
- Search GeneTex for Proteins for KMT2C
- Horizon Cell Lines for KMT2C
- genomics-online: cdna clones - Search results for available KMT2C gene related products
- orf clones - Search results for available KMT2C gene related products
- genomics-online: gRNA clones - Search results for available KMT2C gene related products
- genomics-online: primer clones - Search results for available KMT2C gene related products
- genomics-online: shRNA clones - Search results for available KMT2C gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for KMT2C
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for KMT2C
- GeneCopoeia miRNA 3'UTR Target clone products for KMT2C
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for KMT2C
Sources for KMT2C Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt