Aliases for KIRREL3-AS3 Gene

Subcategory (RNA class) for KIRREL3-AS3 Gene

lncRNA

Aliases for KIRREL3-AS3 Gene

External Ids for KIRREL3-AS3 Gene

Previous HGNC Symbols for KIRREL3-AS3 Gene

  • PRR10
  • NCRNA00288

Previous GeneCards Identifiers for KIRREL3-AS3 Gene

  • GC11U901880
  • GC11P126876

Summaries for KIRREL3-AS3 Gene

GeneCards Summary for KIRREL3-AS3 Gene

KIRREL3-AS3 (KIRREL3 Antisense RNA 3) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KIRREL3-AS3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KIRREL3-AS3 Gene

Genomics for KIRREL3-AS3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KIRREL3-AS3 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KIRREL3-AS3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KIRREL3-AS3 Gene

Latest Assembly
chr11:127,002,909-127,006,059
(GRCh38/hg38)
Size:
3,151 bases
Orientation:
Plus strand

Previous Assembly
chr11:126,872,805-126,875,953
(GRCh37/hg19 by Entrez Gene)
Size:
3,149 bases
Orientation:
Plus strand

chr11:126,872,805-126,875,953
(GRCh37/hg19 by Ensembl)
Size:
3,149 bases
Orientation:
Plus strand

Genomic View for KIRREL3-AS3 Gene

Genes around KIRREL3-AS3 on UCSC Golden Path with GeneCards custom track
KIRREL3-AS3 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
KIRREL3-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIRREL3-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIRREL3-AS3 Gene

Proteins for KIRREL3-AS3 Gene

  • Protein details for KIRREL3-AS3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7Y1-KIAS3_HUMAN
    Recommended name:
    Putative uncharacterized protein KIRREL3-AS3
    Protein Accession:
    Q8N7Y1
    Secondary Accessions:
    • Q14CX1

    Protein attributes for KIRREL3-AS3 Gene

    Size:
    241 amino acids
    Molecular mass:
    25772 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KIRREL3-AS3 Gene

Post-translational modifications for KIRREL3-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIRREL3-AS3 Gene

Domains & Families for KIRREL3-AS3 Gene

Gene Families for KIRREL3-AS3 Gene

Protein Domains for KIRREL3-AS3 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for KIRREL3-AS3 Gene

GenScript: Design optimal peptide antigens:
  • Proline-rich protein 10 (PRR10_HUMAN)
  • Proline rich 10 (Q14CW7_HUMAN)
genes like me logo Genes that share domains with KIRREL3-AS3: view

No data available for Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KIRREL3-AS3 Gene

Function for KIRREL3-AS3 Gene

Phenotypes From GWAS Catalog for KIRREL3-AS3 Gene

Gene Ontology (GO) - Molecular Function for KIRREL3-AS3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with KIRREL3-AS3: view

Phenotypes for KIRREL3-AS3 Gene

GenomeRNAi human phenotypes for KIRREL3-AS3:
genes like me logo Genes that share phenotypes with KIRREL3-AS3: view

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIRREL3-AS3 Gene

Localization for KIRREL3-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIRREL3-AS3 Gene

Pathways & Interactions for KIRREL3-AS3 Gene

PathCards logo

SuperPathways for KIRREL3-AS3 Gene

No Data Available

Interacting Proteins for KIRREL3-AS3 Gene

Selected Interacting proteins: Q8N7Y1-KIAS3_HUMAN for KIRREL3-AS3 Gene via UniProtKB IID

Symbol External ID(s) Details
PSMA3

Gene Ontology (GO) - Biological Process for KIRREL3-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIRREL3-AS3 Gene

Drugs & Compounds for KIRREL3-AS3 Gene

No Compound Related Data Available

Transcripts for KIRREL3-AS3 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for KIRREL3-AS3 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039166A_9606 lncRNA 1771 4

RefSeq: NR_040078,

Ensembl: ENST00000525678 (view in UCSC) ,

LNCipedia: KIRREL3-AS3:1,

NONCODE: NONHSAT025041.2,

URS00008B4251_9606 lncRNA 834 2

LncBook: HSALNT0183032,

LNCipedia: KIRREL3-AS3:2,

URS00009BF242_9606 lncRNA 1768 1

NONCODE: NONHSAT159850.1,

URS0000D57094_9606 lncRNA 831 1

LNCipedia: KIRREL3-AS3:3,

KIRREL3-AS3 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for KIRREL3-AS3 Gene

1 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for KIRREL3-AS3

Alternative Splicing Database (ASD) splice patterns (SP) for KIRREL3-AS3 Gene

No ASD Table

Relevant External Links for KIRREL3-AS3 Gene

GeneLoc Exon Structure for
KIRREL3-AS3

Expression for KIRREL3-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIRREL3-AS3 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for KIRREL3-AS3

SOURCE GeneReport for Unigene cluster for KIRREL3-AS3 Gene:

Hs.730461
genes like me logo Genes that share expression patterns with KIRREL3-AS3: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIRREL3-AS3 Gene

Orthologs for KIRREL3-AS3 Gene

Evolution for KIRREL3-AS3 Gene

ENSEMBL:
Gene Tree for KIRREL3-AS3 (if available)
TreeFam:
Gene Tree for KIRREL3-AS3 (if available)

No data available for Orthologs for KIRREL3-AS3 Gene

Paralogs for KIRREL3-AS3 Gene

(1) SIMAP similar genes for KIRREL3-AS3 Gene using alignment to 1 proteins:

  • KIAS3_HUMAN
genes like me logo Genes that share paralogs with KIRREL3-AS3: view

No data available for Paralogs for KIRREL3-AS3 Gene

Variants for KIRREL3-AS3 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for KIRREL3-AS3 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for KIRREL3-AS3 Gene

Variant ID Type Subtype PubMed ID
esv2761719 CNV gain 21179565
nsv1119424 CNV insertion 24896259
nsv1133177 CNV tandem duplication 24896259
nsv539 CNV insertion 18451855

Additional Variant Information for KIRREL3-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIRREL3-AS3

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for KIRREL3-AS3 Gene

Disorders for KIRREL3-AS3 Gene

Additional Disease Information for KIRREL3-AS3

No disorders were found for KIRREL3-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIRREL3-AS3 Gene

Publications for KIRREL3-AS3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  3. Gsk3β and Tomm20 are substrates of the SCFFbxo7/PARK15 ubiquitin ligase associated with Parkinson's disease. (PMID: 27503909) Teixeira FR … Laman H (The Biochemical journal 2016) 3
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3
  5. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S … Seielstad M (Genes and immunity 2010) 3

Products for KIRREL3-AS3 Gene

Sources for KIRREL3-AS3 Gene