Aliases for KIRREL3-AS2 Gene

Data sources for KIRREL3-AS2 Gene:

Subcategory (RNA class) for KIRREL3-AS2 Gene

lncRNA

Aliases for KIRREL3-AS2 Gene

External Ids for KIRREL3-AS2 Gene

Previous GeneCards Identifiers for KIRREL3-AS2 Gene

  • GC00U933261
  • GC11P126811

Summaries for KIRREL3-AS2 Gene

GeneCards Summary for KIRREL3-AS2 Gene

KIRREL3-AS2 (KIRREL3 Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KIRREL3-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KIRREL3-AS2 Gene

Genomics for KIRREL3-AS2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KIRREL3-AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KIRREL3-AS2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KIRREL3-AS2 Gene

Latest Assembly
chr11:126,940,611-126,948,492
(GRCh38/hg38)
Size:
7,882 bases
Orientation:
Plus strand

Previous Assembly
chr11:126,810,642-126,814,986
(GRCh37/hg19 by Entrez Gene)
Size:
4,345 bases
Orientation:
Plus strand

chr11:126,810,642-126,814,986
(GRCh37/hg19 by Ensembl)
Size:
4,345 bases
Orientation:
Plus strand

Genomic View for KIRREL3-AS2 Gene

Genes around KIRREL3-AS2 on UCSC Golden Path with GeneCards custom track
KIRREL3-AS2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
KIRREL3-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIRREL3-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIRREL3-AS2 Gene

Proteins for KIRREL3-AS2 Gene

Post-translational modifications for KIRREL3-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIRREL3-AS2 Gene

Domains & Families for KIRREL3-AS2 Gene

Gene Families for KIRREL3-AS2 Gene

genes like me logo Genes that share domains with KIRREL3-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KIRREL3-AS2 Gene

Function for KIRREL3-AS2 Gene

Phenotypes From GWAS Catalog for KIRREL3-AS2 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIRREL3-AS2 Gene

Localization for KIRREL3-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIRREL3-AS2 Gene

Pathways & Interactions for KIRREL3-AS2 Gene

PathCards logo

SuperPathways for KIRREL3-AS2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KIRREL3-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KIRREL3-AS2 Gene

Drugs & Compounds for KIRREL3-AS2 Gene

No Compound Related Data Available

Transcripts for KIRREL3-AS2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for KIRREL3-AS2 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000001218C_9606 lncRNA 492 3

Ensembl: ENST00000532988 (view in UCSC) ,

LncBook: HSALNT0183019,

LNCipedia: KIRREL3-AS2:1,

URS00005874AB_9606 lncRNA 432 3

Ensembl: ENST00000578084 (view in UCSC) ,

LNCipedia: KIRREL3-AS2:3,

NONCODE: NONHSAT025037.2,

URS000075C7CB_9606 lncRNA 494 1

RefSeq: NR_046986,

URS00008B9561_9606 lncRNA 573 3

LncBook: HSALNT0183022,

LNCipedia: KIRREL3-AS2:4,

NONCODE: NONHSAT025038.2,

URS00008BB630_9606 lncRNA 497 3

LncBook: HSALNT0183020,

LNCipedia: KIRREL3-AS2:2,

NONCODE: NONHSAT025036.2,

KIRREL3-AS2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for KIRREL3-AS2 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for KIRREL3-AS2 Gene

No ASD Table

Relevant External Links for KIRREL3-AS2 Gene

GeneLoc Exon Structure for
KIRREL3-AS2

Expression for KIRREL3-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIRREL3-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for KIRREL3-AS2 Gene

This gene is overexpressed in Testis (x43.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for KIRREL3-AS2

SOURCE GeneReport for Unigene cluster for KIRREL3-AS2 Gene:

Hs.319053
genes like me logo Genes that share expression patterns with KIRREL3-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIRREL3-AS2 Gene

Orthologs for KIRREL3-AS2 Gene

Evolution for KIRREL3-AS2 Gene

ENSEMBL:
Gene Tree for KIRREL3-AS2 (if available)
TreeFam:
Gene Tree for KIRREL3-AS2 (if available)

No data available for Orthologs for KIRREL3-AS2 Gene

Paralogs for KIRREL3-AS2 Gene

No data available for Paralogs for KIRREL3-AS2 Gene

Variants for KIRREL3-AS2 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for KIRREL3-AS2 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for KIRREL3-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIRREL3-AS2

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KIRREL3-AS2 Gene

Disorders for KIRREL3-AS2 Gene

Additional Disease Information for KIRREL3-AS2

No disorders were found for KIRREL3-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIRREL3-AS2 Gene

Publications for KIRREL3-AS2 Gene

  1. A genome-wide association study identifies protein quantitative trait loci (pQTLs). (PMID: 18464913) Melzer D … Ferrucci L (PLoS genetics 2008) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for KIRREL3-AS2 Gene

Sources for KIRREL3-AS2 Gene