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Aliases for KIF9-AS1 Gene

Subcategory (RNA class) for KIF9-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KIF9-AS1 Gene

  • KIF9 Antisense RNA 1 2 3 5

External Ids for KIF9-AS1 Gene

Previous GeneCards Identifiers for KIF9-AS1 Gene

  • GC03P047205

Summaries for KIF9-AS1 Gene

GeneCards Summary for KIF9-AS1 Gene

KIF9-AS1 (KIF9 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KIF9-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIF9-AS1 Gene

Genomics for KIF9-AS1 Gene

GeneHancer (GH) Regulatory Elements for KIF9-AS1 Gene

Promoters and enhancers for KIF9-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I047161 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 -0.3 -282 4.2 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 SLC30A9 SETD2 KIF9-AS1 PTPN23 BOLA2P2 NBEAL2 CCDC12 DHX30 SCAP PTH1R
GH03I047346 Enhancer 1.2 Ensembl ENCODE 10.7 +183.1 183146 1 PKNOX1 SMAD1 ARNT YBX1 IRF4 TCF12 ZNF766 GATA2 E2F8 ZNF207 ENSG00000280173 NBEAL2 KIF9 KLHL18 KIF9-AS1 SETD2 CCDC12 SCAP PTPN23
GH03I047140 Enhancer 1 Ensembl ENCODE 12.4 -22.9 -22869 1.8 HDGF EGR1 ATF7 IKZF2 RUNX3 CEBPB NFIL3 PRDM6 IKZF1 CEBPA NBEAL2 KIF9-AS1 SETD2 KIF9 KLHL18 PTPN23 MRPL57P3
GH03I047266 Enhancer 1.1 Ensembl ENCODE 10.9 +102.5 102537 1.1 PKNOX1 SMAD1 TCF12 ZNF766 FOS ATF7 RUNX3 ZNF214 NCOA1 JUNB NBEAL2 PRSS46P SETD2 KIF9-AS1 KIF9 KLHL18 SNORD13P3
GH03I047117 Enhancer 0.9 ENCODE 12.6 -46.6 -46565 1 HDAC1 PKNOX1 ARNT CHAMP1 TCF12 ZNF766 E2F8 ZBTB2 NCOA1 ELF1 KIF9-AS1 SETD2 KIF9 KLHL18 CCDC12 MRPL57P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KIF9-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KIF9-AS1 Gene

Genomic Locations for KIF9-AS1 Gene
chr3:47,164,370-47,246,601
(GRCh38/hg38)
Size:
82,232 bases
Orientation:
Plus strand
chr3:47,205,860-47,288,091
(GRCh37/hg19)

Genomic View for KIF9-AS1 Gene

Genes around KIF9-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIF9-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIF9-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIF9-AS1 Gene

Proteins for KIF9-AS1 Gene

Post-translational modifications for KIF9-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIF9-AS1 Gene

Domains & Families for KIF9-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIF9-AS1 Gene

Function for KIF9-AS1 Gene

Phenotypes From GWAS Catalog for KIF9-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIF9-AS1 Gene

Localization for KIF9-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIF9-AS1 Gene

Pathways & Interactions for KIF9-AS1 Gene

SuperPathways for KIF9-AS1 Gene

No Data Available

Interacting Proteins for KIF9-AS1 Gene

Gene Ontology (GO) - Biological Process for KIF9-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIF9-AS1 Gene

Drugs & Compounds for KIF9-AS1 Gene

No Compound Related Data Available

Transcripts for KIF9-AS1 Gene

mRNA/cDNA for KIF9-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIF9-AS1 Gene

KIF9 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIF9-AS1 Gene

No ASD Table

Relevant External Links for KIF9-AS1 Gene

GeneLoc Exon Structure for
KIF9-AS1
ECgene alternative splicing isoforms for
KIF9-AS1

Expression for KIF9-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KIF9-AS1 Gene

SOURCE GeneReport for Unigene cluster for KIF9-AS1 Gene:

Hs.570631
genes like me logo Genes that share expression patterns with KIF9-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIF9-AS1 Gene

Orthologs for KIF9-AS1 Gene

Evolution for KIF9-AS1 Gene

ENSEMBL:
Gene Tree for KIF9-AS1 (if available)
TreeFam:
Gene Tree for KIF9-AS1 (if available)

No data available for Orthologs for KIF9-AS1 Gene

Paralogs for KIF9-AS1 Gene

No data available for Paralogs for KIF9-AS1 Gene

Variants for KIF9-AS1 Gene

Sequence variations from dbSNP and Humsavar for KIF9-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000084528 -- 47,210,935(+) T/C intron_variant
rs1000114736 -- 47,238,650(+) T/C intron_variant
rs1000145157 -- 47,212,468(+) T/A intron_variant
rs1000190767 -- 47,226,361(+) C/T intron_variant
rs1000194981 -- 47,174,944(+) A/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for KIF9-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1373e212 CNV gain 25503493
esv3343630 CNV duplication 20981092
esv3382124 CNV insertion 20981092
esv3386423 CNV duplication 20981092
esv3391060 CNV duplication 20981092
esv3425791 CNV duplication 20981092
esv3596077 CNV gain 21293372
nsv1007714 CNV gain 25217958
nsv238095 CNV deletion 16902084
nsv3801 CNV deletion 18451855
nsv428417 CNV loss 18775914
nsv590210 CNV loss 21841781
nsv590211 CNV gain 21841781

Additional Variant Information for KIF9-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIF9-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KIF9-AS1 Gene

Disorders for KIF9-AS1 Gene

Additional Disease Information for KIF9-AS1

No disorders were found for KIF9-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIF9-AS1 Gene

Publications for KIF9-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for KIF9-AS1 Gene

Sources for KIF9-AS1 Gene

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