Aliases for KIAA1671-AS1 Gene

Subcategory (RNA class) for KIAA1671-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for KIAA1671-AS1 Gene

  • KIAA1671 Antisense RNA 1 2 3
  • Novel Transcript 5
  • Lnc-TMEM211-2 170
  • NONHSAG033539 94
  • HSALNG0134542 169
  • CTA-221G9.11 3
  • AL022323.1 5

External Ids for KIAA1671-AS1 Gene

Summaries for KIAA1671-AS1 Gene

GeneCards Summary for KIAA1671-AS1 Gene

KIAA1671-AS1 (KIAA1671 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KIAA1671-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KIAA1671-AS1 Gene

Genomics for KIAA1671-AS1 Gene

GeneHancer (GH) Regulatory Elements for KIAA1671-AS1 Gene

Promoters and enhancers for KIAA1671-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KIAA1671-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KIAA1671-AS1 Gene

Genomic Locations for KIAA1671-AS1 Gene
chr22:25,101,820-25,112,987
(GRCh38/hg38)
Size:
11,168 bases
Orientation:
Minus strand
chr22:25,498,384-25,508,659
(GRCh37/hg19)
Size:
10,276 bases
Orientation:
Minus strand

Genomic View for KIAA1671-AS1 Gene

Genes around KIAA1671-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIAA1671-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIAA1671-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA1671-AS1 Gene

Proteins for KIAA1671-AS1 Gene

Post-translational modifications for KIAA1671-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIAA1671-AS1 Gene

Domains & Families for KIAA1671-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KIAA1671-AS1 Gene

Function for KIAA1671-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIAA1671-AS1 Gene

Localization for KIAA1671-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIAA1671-AS1 Gene

Pathways & Interactions for KIAA1671-AS1 Gene

PathCards logo

SuperPathways for KIAA1671-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KIAA1671-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIAA1671-AS1 Gene

Drugs & Compounds for KIAA1671-AS1 Gene

No Compound Related Data Available

Transcripts for KIAA1671-AS1 Gene

mRNA/cDNA for KIAA1671-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(11) RNACentral transcripts :
(11) LNCipedia transcripts :
(4) NONCODE transcripts :
(4) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1671-AS1 Gene

No ASD Table

Relevant External Links for KIAA1671-AS1 Gene

GeneLoc Exon Structure for
KIAA1671-AS1
ECgene alternative splicing isoforms for
KIAA1671-AS1

Expression for KIAA1671-AS1 Gene

SOURCE GeneReport for Unigene cluster for KIAA1671-AS1 Gene:

Hs.662126
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIAA1671-AS1 Gene

Orthologs for KIAA1671-AS1 Gene

Evolution for KIAA1671-AS1 Gene

ENSEMBL:
Gene Tree for KIAA1671-AS1 (if available)
TreeFam:
Gene Tree for KIAA1671-AS1 (if available)

No data available for Orthologs for KIAA1671-AS1 Gene

Paralogs for KIAA1671-AS1 Gene

No data available for Paralogs for KIAA1671-AS1 Gene

Variants for KIAA1671-AS1 Gene

Sequence variations from dbSNP and Humsavar for KIAA1671-AS1 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000013949 -- 25,105,080(-) A/G intron_variant
rs1000066419 -- 25,105,319(-) G/A intron_variant
rs1000068911 -- 25,102,734(-) C/T non_coding_transcript_variant
rs1000193826 -- 25,110,473(-) T/A intron_variant
rs1000369085 -- 25,113,693(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for KIAA1671-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2758829 CNV gain+loss 17122850
nsv1110863 OTHER inversion 24896259
nsv1151112 CNV deletion 26484159
nsv3581 CNV insertion 18451855
nsv469581 CNV loss 16826518
nsv7350 OTHER inversion 18451855

Additional Variant Information for KIAA1671-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIAA1671-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KIAA1671-AS1 Gene

Disorders for KIAA1671-AS1 Gene

No disorders were found for KIAA1671-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KIAA1671-AS1 Gene

Publications for KIAA1671-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for KIAA1671-AS1 Gene

Products for KIAA1671-AS1 Gene

Sources for KIAA1671-AS1 Gene