Aliases for KIAA1671-AS1 Gene

Subcategory (RNA class) for KIAA1671-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for KIAA1671-AS1 Gene

  • KIAA1671 Antisense RNA 1 2 3 5
  • KIAA1671-AS1 2 5
  • NONHSAG033539.2 91
  • Lnc-TMEM211-2 165
  • HSALNG0134542 164
  • CTA-221G9.11 3

External Ids for KIAA1671-AS1 Gene

Previous GeneCards Identifiers for KIAA1671-AS1 Gene

  • GC22M027009
  • GC22M027525

Summaries for KIAA1671-AS1 Gene

GeneCards Summary for KIAA1671-AS1 Gene

KIAA1671-AS1 (KIAA1671 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KIAA1671-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KIAA1671-AS1 Gene

Genomics for KIAA1671-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KIAA1671-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KIAA1671-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KIAA1671-AS1 Gene

Genomic Locations for KIAA1671-AS1 Gene
chr22:25,101,820-25,112,987
(GRCh38/hg38)
Size:
11,168 bases
Orientation:
Minus strand
chr22:25,498,384-25,508,659
(GRCh37/hg19)
Size:
10,276 bases
Orientation:
Minus strand

Genomic View for KIAA1671-AS1 Gene

Genes around KIAA1671-AS1 on UCSC Golden Path with GeneCards custom track
KIAA1671-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
KIAA1671-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIAA1671-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA1671-AS1 Gene

Proteins for KIAA1671-AS1 Gene

Post-translational modifications for KIAA1671-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KIAA1671-AS1 Gene

Domains & Families for KIAA1671-AS1 Gene

Gene Families for KIAA1671-AS1 Gene

genes like me logo Genes that share domains with KIAA1671-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KIAA1671-AS1 Gene

Function for KIAA1671-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIAA1671-AS1 Gene

Localization for KIAA1671-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIAA1671-AS1 Gene

Pathways & Interactions for KIAA1671-AS1 Gene

PathCards logo

SuperPathways for KIAA1671-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KIAA1671-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KIAA1671-AS1 Gene

Drugs & Compounds for KIAA1671-AS1 Gene

No Compound Related Data Available

Transcripts for KIAA1671-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for KIAA1671-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075BB43_9606 lncRNA 973 5

HGNC: 41238,

RefSeq: NR_038941,

LncBook: HSALNT0276093,

LNCipedia: lnc-TMEM211-2:3,

NONCODE: NONHSAT084391.2,

URS0000766646_9606 lncRNA 957 2

Ensembl: ENST00000366110 (view in UCSC) ,

LNCipedia: lnc-TMEM211-2:6,

URS00008B2E63_9606 lncRNA 538 3

LncBook: HSALNT0276094,

LNCipedia: lnc-TMEM211-2:5,

NONCODE: NONHSAT084392.2,

URS00008C3A91_9606 lncRNA 428 3

LncBook: HSALNT0276080,

LNCipedia: lnc-TMEM211-2:4,

NONCODE: NONHSAT084390.2,

URS0000D59152_9606 lncRNA 1815 2

LncBook: HSALNT0276082,

LNCipedia: lnc-TMEM211-2:7,

KIAA1671-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for KIAA1671-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1671-AS1 Gene

No ASD Table

Relevant External Links for KIAA1671-AS1 Gene

GeneLoc Exon Structure for
KIAA1671-AS1

Expression for KIAA1671-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for KIAA1671-AS1

SOURCE GeneReport for Unigene cluster for KIAA1671-AS1 Gene:

Hs.662126
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIAA1671-AS1 Gene

Orthologs for KIAA1671-AS1 Gene

Evolution for KIAA1671-AS1 Gene

ENSEMBL:
Gene Tree for KIAA1671-AS1 (if available)
TreeFam:
Gene Tree for KIAA1671-AS1 (if available)

No data available for Orthologs for KIAA1671-AS1 Gene

Paralogs for KIAA1671-AS1 Gene

No data available for Paralogs for KIAA1671-AS1 Gene

Variants for KIAA1671-AS1 Gene

Additional dbSNP identifiers (rs#s) for KIAA1671-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for KIAA1671-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2758829 CNV gain+loss 17122850
nsv1110863 OTHER inversion 24896259
nsv1151112 CNV deletion 26484159
nsv3581 CNV insertion 18451855
nsv469581 CNV loss 16826518
nsv7350 OTHER inversion 18451855

Additional Variant Information for KIAA1671-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIAA1671-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for KIAA1671-AS1 Gene

Disorders for KIAA1671-AS1 Gene

No disorders were found for KIAA1671-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KIAA1671-AS1 Gene

Publications for KIAA1671-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for KIAA1671-AS1 Gene

Products for KIAA1671-AS1 Gene

Sources for KIAA1671-AS1 Gene