Aliases for KIAA0087 Gene

Subcategory (RNA class) for KIAA0087 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for KIAA0087 Gene

  • KIAA0087 LncRNA 2 3 5
  • KIAA0087 2 5 165
  • Uncharacterized Protein KIAA0087 4
  • HSALNG0141614 164

External Ids for KIAA0087 Gene

Previous GeneCards Identifiers for KIAA0087 Gene

  • GC07M026215
  • GC07M026315
  • GC07Mh26675
  • GC07Mh26345
  • GC07U901585

Summaries for KIAA0087 Gene

GeneCards Summary for KIAA0087 Gene

KIAA0087 (KIAA0087 LncRNA) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with KIAA0087 include Endometrial Cancer and Pancreatic Cancer.

Additional gene information for KIAA0087 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KIAA0087 Gene

Genomics for KIAA0087 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KIAA0087 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KIAA0087 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the KIAA0087 gene promoter:
  • AP-1
  • c-Fos
  • c-Jun
  • FOXI1
  • HFH-3
  • PPAR-gamma1
  • PPAR-gamma2
  • SRF
  • SRF (504 AA)
  • SRY

Genomic Locations for KIAA0087 Gene

Genomic Locations for KIAA0087 Gene
chr7:26,533,120-26,538,825
(GRCh38/hg38)
Size:
5,706 bases
Orientation:
Minus strand
chr7:26,572,740-26,578,444
(GRCh37/hg19)
Size:
5,705 bases
Orientation:
Minus strand

Genomic View for KIAA0087 Gene

Genes around KIAA0087 on UCSC Golden Path with GeneCards custom track
KIAA0087 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
KIAA0087 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIAA0087 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA0087 Gene

Proteins for KIAA0087 Gene

  • Protein details for KIAA0087 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q14695-K0087_HUMAN
    Recommended name:
    Uncharacterized protein KIAA0087
    Protein Accession:
    Q14695
    Secondary Accessions:
    • A1A524
    • Q75MW1

    Protein attributes for KIAA0087 Gene

    Size:
    138 amino acids
    Molecular mass:
    14937 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA07639.2; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for KIAA0087 Gene

Post-translational modifications for KIAA0087 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for KIAA0087 Gene

Domains & Families for KIAA0087 Gene

Gene Families for KIAA0087 Gene

Protein Domains for KIAA0087 Gene

ProtoNet:
genes like me logo Genes that share domains with KIAA0087: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KIAA0087 Gene

Function for KIAA0087 Gene

Phenotypes From GWAS Catalog for KIAA0087 Gene

Phenotypes for KIAA0087 Gene

genes like me logo Genes that share phenotypes with KIAA0087: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIAA0087 Gene

Localization for KIAA0087 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for KIAA0087 gene
Compartment Confidence
extracellular 2
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KIAA0087 Gene

Pathways & Interactions for KIAA0087 Gene

PathCards logo

SuperPathways for KIAA0087 Gene

No Data Available

Interacting Proteins for KIAA0087 Gene

Selected Interacting proteins: Q14695-K0087_HUMAN for KIAA0087 Gene via IID

Gene Ontology (GO) - Biological Process for KIAA0087 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIAA0087 Gene

Drugs & Compounds for KIAA0087 Gene

No Compound Related Data Available

Transcripts for KIAA0087 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for KIAA0087 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075EF0D_9606 lncRNA 4320 3

HGNC: 22191,

RefSeq: NR_022006,

LNCipedia: KIAA0087:4,

URS0000811B67_9606 lncRNA 4283 2

Ensembl: ENST00000242109 (view in UCSC) ,

LNCipedia: KIAA0087:5,

URS0000EB0A78_9606 lncRNA 4322 1

LncBook: HSALNT0289503,

KIAA0087 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for KIAA0087 Gene

1 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA0087 Gene

No ASD Table

Relevant External Links for KIAA0087 Gene

GeneLoc Exon Structure for
KIAA0087

Expression for KIAA0087 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIAA0087 Gene

mRNA differential expression in normal tissues according to GTEx for KIAA0087 Gene

This gene is overexpressed in Brain - Cerebellum (x9.6) and Brain - Cerebellar Hemisphere (x9.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for KIAA0087

SOURCE GeneReport for Unigene cluster for KIAA0087 Gene:

Hs.69749
genes like me logo Genes that share expression patterns with KIAA0087: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KIAA0087 Gene

Orthologs for KIAA0087 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for KIAA0087 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia KIAA0087 31
  • 96 (a)
OneToOne
Species where no ortholog for KIAA0087 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for KIAA0087 Gene

ENSEMBL:
Gene Tree for KIAA0087 (if available)
TreeFam:
Gene Tree for KIAA0087 (if available)

Paralogs for KIAA0087 Gene

No data available for Paralogs for KIAA0087 Gene

Variants for KIAA0087 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for KIAA0087 Gene

SNP ID Clinical significance and condition Chr 07 pos Variation AA Info Type
rs740182 - p.Ser85Asn

Additional dbSNP identifiers (rs#s) for KIAA0087 Gene

Structural Variations from Database of Genomic Variants (DGV) for KIAA0087 Gene

Variant ID Type Subtype PubMed ID
nsv7393 OTHER inversion 18451855

Variation tolerance for KIAA0087 Gene

Gene Damage Index Score: 0.63; 13.42% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for KIAA0087 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIAA0087

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIAA0087 Gene

Disorders for KIAA0087 Gene

MalaCards: The human disease database

(2) MalaCards diseases for KIAA0087 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
endometrial cancer
  • endometrial cancer, familial
pancreatic cancer
  • pancreatic carcinoma
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for KIAA0087

genes like me logo Genes that share disorders with KIAA0087: view

No data available for UniProtKB/Swiss-Prot and Genatlas for KIAA0087 Gene

Publications for KIAA0087 Gene

  1. Distinct expression profile of lncRNA in endometrial carcinoma. (PMID: 27748922) Xu J … Lv J (Oncology reports 2016) 2 3
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 4
  3. Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIAA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1. (PMID: 7788527) Nagase T … Kotani H (DNA research : an international journal for rapid publication of reports on genes and genomes 1995) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  5. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U … Wanker EE (Cell 2005) 3

Products for KIAA0087 Gene

Sources for KIAA0087 Gene