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Aliases for KDM4A-AS1 Gene

Subcategory (RNA class) for KDM4A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for KDM4A-AS1 Gene

  • KDM4A Antisense RNA 1 2 3 5
  • KDM4A Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for KDM4A-AS1 Gene

Previous GeneCards Identifiers for KDM4A-AS1 Gene

  • GC01M044167

Summaries for KDM4A-AS1 Gene

GeneCards Summary for KDM4A-AS1 Gene

KDM4A-AS1 (KDM4A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KDM4A-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KDM4A-AS1 Gene

Genomics for KDM4A-AS1 Gene

GeneHancer (GH) Regulatory Elements for KDM4A-AS1 Gene

Promoters and enhancers for KDM4A-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J043705 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 611.9 +0.5 543 3.8 SP1 ELF3 ZFX MNT ZNF148 NKRF POLR2A GTF2F1 ZNF687 ZSCAN21 KDM4A-AS1 ST3GAL3 SZT2 DMAP1 HYI ARTN ZNF691 P3H1 KDM4A SZT2-AS1
GH01J044212 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 49.2 -505.4 -505425 2.5 ZFX SP1 CC2D1A ELF3 SIX5 NKRF MLLT1 ZNF121 POLR2A GTF2F1 DMAP1 SZT2 KDM4A-AS1 ARTN HYI KDM4A ENSG00000237950 RPS8 MED8 HECTD3
GH01J043530 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11 +174.2 174221 8.9 CC2D1A SP1 ELF3 POLR2A ZSCAN21 MAFK TFE3 ZBTB7A SP7 KLF14 PTPRF KDM4A-AS1 ST3GAL3 ARTN ENSG00000237950 IPO13 HYI MED8 GC01M043545
GH01J042949 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.1 +751.3 751255 15.5 MTA3 SP1 CC2D1A ZFX ZKSCAN8 MNT CBFA2T2 ZNF148 NKRF POLR2A SLC2A1 SLC2A1-AS1 SZT2 ARTN PPIH P3H1 MED8 RNU6-880P ERMAP ENSG00000237950
GH01J042764 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 12.4 +941.6 941637 4.2 HDGF ZFX ELF3 CBFA2T2 NKRF POLR2A MLLT1 GTF2F1 ZNF384 ZNF687 P3H1 ENSG00000283580 C1orf50 PPIH SVBP SZT2 FOXJ3 KDM4A-AS1 MED8 ZNF691
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KDM4A-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KDM4A-AS1 Gene

Genomic Locations for KDM4A-AS1 Gene
8,415 bases
Minus strand
8,415 bases
Minus strand

Genomic View for KDM4A-AS1 Gene

Genes around KDM4A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KDM4A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KDM4A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KDM4A-AS1 Gene

Proteins for KDM4A-AS1 Gene

Post-translational modifications for KDM4A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KDM4A-AS1 Gene

Domains & Families for KDM4A-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KDM4A-AS1 Gene

Function for KDM4A-AS1 Gene

Phenotypes From GWAS Catalog for KDM4A-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KDM4A-AS1 Gene

Localization for KDM4A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KDM4A-AS1 Gene

Pathways & Interactions for KDM4A-AS1 Gene

PathCards logo

SuperPathways for KDM4A-AS1 Gene

No Data Available

Interacting Proteins for KDM4A-AS1 Gene

Gene Ontology (GO) - Biological Process for KDM4A-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KDM4A-AS1 Gene

Drugs & Compounds for KDM4A-AS1 Gene

No Compound Related Data Available

Transcripts for KDM4A-AS1 Gene

mRNA/cDNA for KDM4A-AS1 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNA Central transcripts :

Unigene Clusters for KDM4A-AS1 Gene

KDM4A antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KDM4A-AS1 Gene

No ASD Table

Relevant External Links for KDM4A-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KDM4A-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KDM4A-AS1 Gene

SOURCE GeneReport for Unigene cluster for KDM4A-AS1 Gene:

genes like me logo Genes that share expression patterns with KDM4A-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KDM4A-AS1 Gene

Orthologs for KDM4A-AS1 Gene

Evolution for KDM4A-AS1 Gene

Gene Tree for KDM4A-AS1 (if available)
Gene Tree for KDM4A-AS1 (if available)

No data available for Orthologs for KDM4A-AS1 Gene

Paralogs for KDM4A-AS1 Gene

No data available for Paralogs for KDM4A-AS1 Gene

Variants for KDM4A-AS1 Gene

Sequence variations from dbSNP and Humsavar for KDM4A-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000082462 -- 43,699,794(-) A/C non_coding_transcript_variant
rs1000259340 -- 43,700,240(-) G/C non_coding_transcript_variant
rs1000610144 -- 43,700,459(-) T/C non_coding_transcript_variant
rs1000635831 -- 43,709,002(-) A/G upstream_transcript_variant
rs1000657287 -- 43,705,223(-) G/A/C intron_variant

Additional Variant Information for KDM4A-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KDM4A-AS1 Gene

Disorders for KDM4A-AS1 Gene

Additional Disease Information for KDM4A-AS1

No disorders were found for KDM4A-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KDM4A-AS1 Gene

Publications for KDM4A-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for KDM4A-AS1 Gene

Sources for KDM4A-AS1 Gene

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