Aliases for KDM2B-DT Gene

Data sources for KDM2B-DT Gene:

Subcategory (RNA class) for KDM2B-DT Gene

lncRNA

Aliases for KDM2B-DT Gene

External Ids for KDM2B-DT Gene

Previous GeneCards Identifiers for KDM2B-DT Gene

  • GC12P122462
  • GC12P122672
  • GC12P122876

Summaries for KDM2B-DT Gene

GeneCards Summary for KDM2B-DT Gene

KDM2B-DT (KDM2B Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KDM2B-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KDM2B-DT Gene

Genomics for KDM2B-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KDM2B-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KDM2B-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KDM2B-DT Gene

Latest Assembly
chr12:121,580,333-121,596,184
(GRCh38/hg38)
Size:
15,852 bases
Orientation:
Plus strand

Previous Assembly
chr12:122,018,697-122,031,409
(GRCh37/hg19 by Ensembl)
Size:
12,713 bases
Orientation:
Plus strand

Genomic View for KDM2B-DT Gene

Genes around KDM2B-DT on UCSC Golden Path with GeneCards custom track
KDM2B-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
KDM2B-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KDM2B-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KDM2B-DT Gene

Proteins for KDM2B-DT Gene

Post-translational modifications for KDM2B-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for KDM2B-DT Gene

Domains & Families for KDM2B-DT Gene

Gene Families for KDM2B-DT Gene

genes like me logo Genes that share domains with KDM2B-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KDM2B-DT Gene

Function for KDM2B-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KDM2B-DT Gene

Localization for KDM2B-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KDM2B-DT Gene

Pathways & Interactions for KDM2B-DT Gene

PathCards logo

SuperPathways for KDM2B-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for KDM2B-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KDM2B-DT Gene

Drugs & Compounds for KDM2B-DT Gene

No Compound Related Data Available

Transcripts for KDM2B-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for KDM2B-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004F6F07_9606 lncRNA 544 1

Ensembl: ENST00000541574 (view in UCSC) ,

URS00008B287A_9606 lncRNA 1016 2

LncBook: HSALNT0196087,

NONCODE: NONHSAT031432.2,

URS0001BF28D4_9606 lncRNA 1016 1

LncBook: HSALNT0196087,

URS00009C3CDC_9606 lncRNA 763 1

NONCODE: NONHSAT162892.1,

KDM2B-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for KDM2B-DT Gene

No ASD Table

Relevant External Links for KDM2B-DT Gene

GeneLoc Exon Structure for
KDM2B-DT

No data available for mRNA/cDNA for KDM2B-DT Gene

Expression for KDM2B-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KDM2B-DT Gene

Orthologs for KDM2B-DT Gene

Evolution for KDM2B-DT Gene

ENSEMBL:
Gene Tree for KDM2B-DT (if available)
TreeFam:
Gene Tree for KDM2B-DT (if available)

No data available for Orthologs for KDM2B-DT Gene

Paralogs for KDM2B-DT Gene

No data available for Paralogs for KDM2B-DT Gene

Variants for KDM2B-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for KDM2B-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for KDM2B-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KDM2B-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KDM2B-DT Gene

Disorders for KDM2B-DT Gene

Additional Disease Information for KDM2B-DT

Open Targets Platform
Open Targets Platform

No disorders were found for KDM2B-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KDM2B-DT Gene

Publications for KDM2B-DT Gene

No publications were found for KDM2B-DT Gene.

No data available for Mastermind for KDM2B-DT Gene

Products for KDM2B-DT Gene

Sources for KDM2B-DT Gene