Aliases for KCTD5P1 Gene

Aliases for KCTD5P1 Gene

  • KCTD5 Pseudogene 1 2 3 5
  • Potassium Channel Tetramerisation Domain Containing 5 Pseudogene 3
  • Potassium Channel Tetramerization Domain Containing 5 Pseudogene 3
  • KCTD5P1 5

External Ids for KCTD5P1 Gene

Summaries for KCTD5P1 Gene

GeneCards Summary for KCTD5P1 Gene

KCTD5P1 (KCTD5 Pseudogene 1) is a Pseudogene.

Additional gene information for KCTD5P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KCTD5P1 Gene

Genomics for KCTD5P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KCTD5P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J241479 Enhancer 0.7 ENCODE 250.7 +1.3 1326 1.1 MXD4 THAP11 SAP130 ZSCAN9 GABPB1 TEAD3 JUND TBP DRAP1 MBD1 KCTD5P1 MIR3133 FARP2 STK25 SEPTIN2 ANO7 lnc-STK25-3 HSALNG0023685
GH02J241616 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 10.7 +140.5 140524 4.5 ZBTB10 SIX5 NR2C1 ETS1 ZNF217 ZEB1 ELF1 THAP11 HCFC1 ZNF639 THAP4 ING5 ENSG00000223374 MTERF4 SNED1 ENSG00000235351 FARP2 BOK D2HGDH DTYMK
GH02J242084 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas 10.6 +609.1 609127 5.5 ZBTB10 SP1 MXD4 CEBPA MNT SMAD5 BHLHE40 ZEB1 ELF1 ZIC2 ENSG00000261186 LINC01881 FARP2 ENSG00000235351 KCTD5P1 MTERF4 LINC01880 NEU4 ATG4B FAM240C
GH02J241543 Enhancer 1.1 ENCODE CraniofacialAtlas 11.5 +67.9 67891 4.4 PLRG1 FOXA1 IRF2 NONO ZIC2 ZNF513 RAD51 VEZF1 SAP130 NBN lnc-BOK-4 ENSG00000223374 ATG4B MTERF4 ANKMY1 ING5 CAPN10 ENSG00000235351 FARP2 D2HGDH
GH02J240611 Enhancer 1 Ensembl ENCODE 10.6 -864.8 -864757 5.5 FOXA1 IKZF1 HES1 ARNT NBN NONO ZEB2 TAL1 TAF9B NCOR1 SNED1 FARP2 KCTD5P1 MTERF4 CAPN10 GPR35 ANKMY1 lnc-ANKMY1-3 AQP12B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KCTD5P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KCTD5P1 Gene

Latest Assembly
chr2:241,478,310-241,479,189
(GRCh38/hg38)
Size:
880 bases
Orientation:
Plus strand

Previous Assembly
chr2:242,417,725-242,418,604
(GRCh37/hg19 by Entrez Gene)
Size:
880 bases
Orientation:
Plus strand

chr2:242,417,731-242,418,408
(GRCh37/hg19 by Ensembl)
Size:
678 bases
Orientation:
Plus strand

Genomic View for KCTD5P1 Gene

Genes around KCTD5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCTD5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCTD5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCTD5P1 Gene

Proteins for KCTD5P1 Gene

Post-translational modifications for KCTD5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCTD5P1 Gene

Domains & Families for KCTD5P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KCTD5P1 Gene

Function for KCTD5P1 Gene

Phenotypes From GWAS Catalog for KCTD5P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCTD5P1 Gene

Localization for KCTD5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCTD5P1 Gene

Pathways & Interactions for KCTD5P1 Gene

PathCards logo

SuperPathways for KCTD5P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KCTD5P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KCTD5P1 Gene

Drugs & Compounds for KCTD5P1 Gene

No Compound Related Data Available

Transcripts for KCTD5P1 Gene

mRNA/cDNA for KCTD5P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCTD5P1 Gene

No ASD Table

Relevant External Links for KCTD5P1 Gene

GeneLoc Exon Structure for
KCTD5P1

Expression for KCTD5P1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCTD5P1 Gene

Orthologs for KCTD5P1 Gene

Evolution for KCTD5P1 Gene

ENSEMBL:
Gene Tree for KCTD5P1 (if available)
TreeFam:
Gene Tree for KCTD5P1 (if available)

No data available for Orthologs for KCTD5P1 Gene

Paralogs for KCTD5P1 Gene

No data available for Paralogs for KCTD5P1 Gene

Variants for KCTD5P1 Gene

Additional Variant Information for KCTD5P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCTD5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCTD5P1 Gene

Disorders for KCTD5P1 Gene

No disorders were found for KCTD5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KCTD5P1 Gene

Publications for KCTD5P1 Gene

No publications were found for KCTD5P1 Gene.

No data available for Mastermind for KCTD5P1 Gene

Products for KCTD5P1 Gene

Sources for KCTD5P1 Gene