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Aliases for KCNMA1-AS2 Gene

Subcategory (RNA class) for KCNMA1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for KCNMA1-AS2 Gene

  • KCNMA1 Antisense RNA 2 2 3 5

External Ids for KCNMA1-AS2 Gene

Summaries for KCNMA1-AS2 Gene

GeneCards Summary for KCNMA1-AS2 Gene

KCNMA1-AS2 (KCNMA1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KCNMA1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNMA1-AS2 Gene

Genomics for KCNMA1-AS2 Gene

GeneHancer (GH) Regulatory Elements for KCNMA1-AS2 Gene

Promoters and enhancers for KCNMA1-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077149 Enhancer 0.5 Ensembl 18.6 +10.3 10270 4.2 ZNF548 PRDM1 ZNF512 ZNF316 ZNF366 KCNMA1-AS2 GC10P077253 KCNMA1
GH10J077136 Enhancer 0.5 Ensembl 16.9 -3.6 -3630 0.8 HDAC1 USF1 KDM1A GLIS1 KCNMA1-AS2 GC10P077085 KCNMA1
GH10J077162 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 5.1 +23.5 23506 4.5 CTCF NCOA3 MAFK RAD21 FOSL2 CREB1 POLR2A PKNOX1 NFE2L2 REST POLR3A KCNMA1 KCNMA1-AS3 KCNMA1-AS2 GC10P077253
GH10J077156 Enhancer 0.8 ENCODE dbSUPER 5.1 +16.5 16480 2.3 SP1 NR2F2 FOSL2 GATA3 JUND GLIS1 PRDM6 ZBTB33 KCNMA1 KCNMA1-AS2 GC10P077253
GH10J077144 Enhancer 0.2 Ensembl 9.1 +4.3 4270 1 KCNMA1-AS2 GC10P077253 KCNMA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KCNMA1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KCNMA1-AS2 Gene

Genomic Locations for KCNMA1-AS2 Gene
chr10:77,140,831-77,150,100
(GRCh38/hg38)
Size:
9,270 bases
Orientation:
Plus strand
chr10:78,907,410-78,909,858
(GRCh37/hg19)
Size:
2,449 bases
Orientation:
Plus strand

Genomic View for KCNMA1-AS2 Gene

Genes around KCNMA1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNMA1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNMA1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNMA1-AS2 Gene

Proteins for KCNMA1-AS2 Gene

Post-translational modifications for KCNMA1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNMA1-AS2 Gene

Domains & Families for KCNMA1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNMA1-AS2 Gene

Function for KCNMA1-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNMA1-AS2 Gene

Localization for KCNMA1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCNMA1-AS2 Gene

Pathways & Interactions for KCNMA1-AS2 Gene

PathCards logo

SuperPathways for KCNMA1-AS2 Gene

No Data Available

Interacting Proteins for KCNMA1-AS2 Gene

Gene Ontology (GO) - Biological Process for KCNMA1-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNMA1-AS2 Gene

Drugs & Compounds for KCNMA1-AS2 Gene

No Compound Related Data Available

Transcripts for KCNMA1-AS2 Gene

mRNA/cDNA for KCNMA1-AS2 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNMA1-AS2 Gene

No ASD Table

Relevant External Links for KCNMA1-AS2 Gene

GeneLoc Exon Structure for
KCNMA1-AS2
ECgene alternative splicing isoforms for
KCNMA1-AS2

Expression for KCNMA1-AS2 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNMA1-AS2 Gene

Orthologs for KCNMA1-AS2 Gene

Evolution for KCNMA1-AS2 Gene

ENSEMBL:
Gene Tree for KCNMA1-AS2 (if available)
TreeFam:
Gene Tree for KCNMA1-AS2 (if available)

No data available for Orthologs for KCNMA1-AS2 Gene

Paralogs for KCNMA1-AS2 Gene

No data available for Paralogs for KCNMA1-AS2 Gene

Variants for KCNMA1-AS2 Gene

Sequence variations from dbSNP and Humsavar for KCNMA1-AS2 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000174874 -- 77,144,748(+) C/T intron_variant
rs1000459016 -- 77,145,925(+) G/C intron_variant
rs1000845798 -- 77,148,160(+) C/T intron_variant
rs1001288899 -- 77,148,901(+) C/T intron_variant
rs1001482011 -- 77,147,518(+) A/G intron_variant

Additional Variant Information for KCNMA1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNMA1-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNMA1-AS2 Gene

Disorders for KCNMA1-AS2 Gene

Additional Disease Information for KCNMA1-AS2

No disorders were found for KCNMA1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNMA1-AS2 Gene

Publications for KCNMA1-AS2 Gene

No publications were found for KCNMA1-AS2 Gene.

No data available for External Links for KCNMA1-AS2 Gene

Products for KCNMA1-AS2 Gene

Sources for KCNMA1-AS2 Gene

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