Aliases for KCNK15-AS1 Gene

Subcategory (RNA class) for KCNK15-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for KCNK15-AS1 Gene

  • KCNK15 And WISP2 Antisense RNA 1 2 3 5
  • KCNK15 Antisense RNA 1 (Head To Head) 2 3
  • HSALNG0130331 169
  • NONHSAG031840 94
  • KCNK15-AS1 2
  • Lnc-ADA-3 170

External Ids for KCNK15-AS1 Gene

Previous GeneCards Identifiers for KCNK15-AS1 Gene

  • GC00U935882

Summaries for KCNK15-AS1 Gene

GeneCards Summary for KCNK15-AS1 Gene

KCNK15-AS1 (KCNK15 And WISP2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with KCNK15-AS1 include Osteoarthritis and Breast Cancer.

Additional gene information for KCNK15-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KCNK15-AS1 Gene

Genomics for KCNK15-AS1 Gene

GeneHancer (GH) Regulatory Elements for KCNK15-AS1 Gene

Promoters and enhancers for KCNK15-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KCNK15-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KCNK15-AS1 Gene

Genomic Locations for KCNK15-AS1 Gene
chr20:44,694,892-44,746,227
(GRCh38/hg38)
Size:
51,336 bases
Orientation:
Minus strand

Genomic View for KCNK15-AS1 Gene

Genes around KCNK15-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNK15-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNK15-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNK15-AS1 Gene

Proteins for KCNK15-AS1 Gene

Post-translational modifications for KCNK15-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNK15-AS1 Gene

Domains & Families for KCNK15-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KCNK15-AS1 Gene

Function for KCNK15-AS1 Gene

Phenotypes From GWAS Catalog for KCNK15-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNK15-AS1 Gene

Localization for KCNK15-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCNK15-AS1 Gene

Pathways & Interactions for KCNK15-AS1 Gene

PathCards logo

SuperPathways for KCNK15-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KCNK15-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNK15-AS1 Gene

Drugs & Compounds for KCNK15-AS1 Gene

No Compound Related Data Available

Transcripts for KCNK15-AS1 Gene

mRNA/cDNA for KCNK15-AS1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(27) RNACentral transcripts :
(13) NONCODE transcripts :
(26) LNCipedia transcripts :
(16) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNK15-AS1 Gene

No ASD Table

Relevant External Links for KCNK15-AS1 Gene

GeneLoc Exon Structure for
KCNK15-AS1
ECgene alternative splicing isoforms for
KCNK15-AS1

Expression for KCNK15-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCNK15-AS1 Gene

genes like me logo Genes that share expression patterns with KCNK15-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNK15-AS1 Gene

Orthologs for KCNK15-AS1 Gene

Evolution for KCNK15-AS1 Gene

ENSEMBL:
Gene Tree for KCNK15-AS1 (if available)
TreeFam:
Gene Tree for KCNK15-AS1 (if available)

No data available for Orthologs for KCNK15-AS1 Gene

Paralogs for KCNK15-AS1 Gene

No data available for Paralogs for KCNK15-AS1 Gene

Variants for KCNK15-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCNK15-AS1 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000248497 -- 44,746,114(-) G/A non_coding_transcript_variant
rs1000254985 -- 44,739,957(-) C/T intron_variant
rs1000265194 -- 44,727,717(-) G/A intron_variant
rs1000439480 -- 44,715,347(-) T/C/G intron_variant
rs1000457229 -- 44,733,886(-) T/C intron_variant

Additional Variant Information for KCNK15-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNK15-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNK15-AS1 Gene

Disorders for KCNK15-AS1 Gene

MalaCards: The human disease database

(2) MalaCards diseases for KCNK15-AS1 Gene - From: LncRNADisease, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
osteoarthritis
  • kashin-beck disease
breast cancer
  • breast cancer, familial
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for KCNK15-AS1

genes like me logo Genes that share disorders with KCNK15-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for KCNK15-AS1 Gene

Publications for KCNK15-AS1 Gene

  1. Identification of long noncoding RNA associated with osteoarthritis in humans. (PMID: 25430712) Xing D … Ma XL (Orthopaedic surgery 2014) 2 3 56
  2. ALKBH5 Inhibits Pancreatic Cancer Motility by Decreasing Long Non-Coding RNA KCNK15-AS1 Methylation. (PMID: 30032148) He Y … Miao Y (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2018) 3 56
  3. Knockdown of Long Non-Coding RNA RP11-445H22.4 Alleviates LPS-Induced Injuries by Regulation of MiR-301a in Osteoarthritis. (PMID: 29414810) Sun T … Wang Y (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2018) 3 56
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 56

Products for KCNK15-AS1 Gene

Sources for KCNK15-AS1 Gene