Aliases for KCNJ6-AS1 Gene

Subcategory (RNA class) for KCNJ6-AS1 Gene

lncRNA

Aliases for KCNJ6-AS1 Gene

  • KCNJ6 Antisense RNA 1 2 3
  • KCNJ6 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • KCNJ6-IT1 3

External Ids for KCNJ6-AS1 Gene

Previous HGNC Symbols for KCNJ6-AS1 Gene

  • KCNJ6-IT1

Previous GeneCards Identifiers for KCNJ6-AS1 Gene

  • GC21M039091
  • GC21M037717

Summaries for KCNJ6-AS1 Gene

GeneCards Summary for KCNJ6-AS1 Gene

KCNJ6-AS1 (KCNJ6 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KCNJ6-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KCNJ6-AS1 Gene

Genomics for KCNJ6-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KCNJ6-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J037709 Enhancer 1 ENCODE CraniofacialAtlas 0.7 -4.9 -4881 2.9 CTCF ZNF629 ZNF512 ZNF692 FOXA1 PRDM1 ZNF143 ZIC2 PKNOX1 REST TTC3-AS1 ENSG00000242553 KCNJ6 KCNJ6-AS1 LOC107985507 LOC105372798
GH21J037700 Enhancer 0.8 ENCODE 0.4 -15.0 -15023 0.2 CTCF IKZF1 KDM1A JUND ZNF143 REST RAD21 RCOR1 ZNF341 MTA3 KCNJ6 LOC107985507 KCNJ6-AS1 LOC105372798
GH21J037737 Enhancer 0.4 Ensembl dbSUPER 0.4 +21.9 21918 0.8 ZIC2 KCNJ6 LOC101928368 ENSG00000233213 KCNJ6-AS1 LOC105372798
GH21J037736 Enhancer 0.3 Ensembl dbSUPER 0.4 +21.4 21405 0.2 KCNJ6 LOC101928368 ENSG00000233213 KCNJ6-AS1 LOC105372798
GH21J037739 Enhancer 0.2 FANTOM5 0.4 +24.1 24107 0.3 LOC101928368 KCNJ6-AS1 ENSG00000233213 LOC105372798 KCNJ6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KCNJ6-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KCNJ6-AS1 Gene

Genomic Locations for KCNJ6-AS1 Gene
chr21:37,715,896-37,740,501
(GRCh38/hg38)
Size:
24,606 bases
Orientation:
Plus strand
chr21:39,089,405-39,091,872
(GRCh37/hg19)
Size:
2,468 bases
Orientation:
Minus strand

Genomic View for KCNJ6-AS1 Gene

Genes around KCNJ6-AS1 on UCSC Golden Path with GeneCards custom track
KCNJ6-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
KCNJ6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNJ6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNJ6-AS1 Gene

Proteins for KCNJ6-AS1 Gene

Post-translational modifications for KCNJ6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNJ6-AS1 Gene

Domains & Families for KCNJ6-AS1 Gene

Gene Families for KCNJ6-AS1 Gene

genes like me logo Genes that share domains with KCNJ6-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KCNJ6-AS1 Gene

Function for KCNJ6-AS1 Gene

Phenotypes From GWAS Catalog for KCNJ6-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNJ6-AS1 Gene

Localization for KCNJ6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCNJ6-AS1 Gene

Pathways & Interactions for KCNJ6-AS1 Gene

PathCards logo

SuperPathways for KCNJ6-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KCNJ6-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KCNJ6-AS1 Gene

Drugs & Compounds for KCNJ6-AS1 Gene

No Compound Related Data Available

Transcripts for KCNJ6-AS1 Gene

KCNJ6-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

mRNA/cDNA for KCNJ6-AS1 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for KCNJ6-AS1 Gene

No ASD Table

Relevant External Links for KCNJ6-AS1 Gene

GeneLoc Exon Structure for
KCNJ6-AS1

Expression for KCNJ6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KCNJ6-AS1 Gene

genes like me logo Genes that share expression patterns with KCNJ6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNJ6-AS1 Gene

Orthologs for KCNJ6-AS1 Gene

No data available for Orthologs and Evolution for KCNJ6-AS1 Gene

Paralogs for KCNJ6-AS1 Gene

No data available for Paralogs for KCNJ6-AS1 Gene

Variants for KCNJ6-AS1 Gene

Additional dbSNP identifiers (rs#s) for KCNJ6-AS1 Gene

Additional Variant Information for KCNJ6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNJ6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNJ6-AS1 Gene

Disorders for KCNJ6-AS1 Gene

No disorders were found for KCNJ6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KCNJ6-AS1 Gene

Publications for KCNJ6-AS1 Gene

No publications were found for KCNJ6-AS1 Gene.

No data available for Mastermind for KCNJ6-AS1 Gene

Products for KCNJ6-AS1 Gene

Sources for KCNJ6-AS1 Gene