Aliases for KCNIP2-AS1 Gene

Subcategory (RNA class) for KCNIP2-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for KCNIP2-AS1 Gene

  • KCNIP2 Antisense RNA 1 2 3 5
  • KCNIP2-AS1 2 5
  • NONHSAG006735.2 91
  • HSALNG0080249 164
  • Lnc-DPCD-11 165

External Ids for KCNIP2-AS1 Gene

Previous GeneCards Identifiers for KCNIP2-AS1 Gene

  • GC10P103579

Summaries for KCNIP2-AS1 Gene

GeneCards Summary for KCNIP2-AS1 Gene

KCNIP2-AS1 (KCNIP2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KCNIP2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KCNIP2-AS1 Gene

Genomics for KCNIP2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KCNIP2-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KCNIP2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KCNIP2-AS1 Gene

Genomic Locations for KCNIP2-AS1 Gene
chr10:101,818,768-101,829,564
(GRCh38/hg38)
Size:
10,797 bases
Orientation:
Plus strand
chr10:103,578,825-103,588,646
(GRCh37/hg19)
Size:
9,822 bases
Orientation:
Plus strand

Genomic View for KCNIP2-AS1 Gene

Genes around KCNIP2-AS1 on UCSC Golden Path with GeneCards custom track
KCNIP2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
KCNIP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNIP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNIP2-AS1 Gene

Proteins for KCNIP2-AS1 Gene

Post-translational modifications for KCNIP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNIP2-AS1 Gene

Domains & Families for KCNIP2-AS1 Gene

Gene Families for KCNIP2-AS1 Gene

genes like me logo Genes that share domains with KCNIP2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KCNIP2-AS1 Gene

Function for KCNIP2-AS1 Gene

Phenotypes From GWAS Catalog for KCNIP2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNIP2-AS1 Gene

Localization for KCNIP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCNIP2-AS1 Gene

Pathways & Interactions for KCNIP2-AS1 Gene

PathCards logo

SuperPathways for KCNIP2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KCNIP2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KCNIP2-AS1 Gene

Drugs & Compounds for KCNIP2-AS1 Gene

No Compound Related Data Available

Transcripts for KCNIP2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for KCNIP2-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075ABA8_9606 lncRNA 970 2

HGNC: 48680,

RefSeq: NR_045118,

URS0000EF29ED_9606 lncRNA 1234 1

Ensembl: ENST00000412353 (view in UCSC) ,

URS00008C004F_9606 lncRNA 1672 1

NONCODE: NONHSAT016077.2,

URS0000D5CA94_9606 lncRNA 1671 1

LNCipedia: lnc-DPCD-11:1,

URS00009AF1F9_9606 lncRNA 1164 1

NONCODE: NONHSAT156003.1,

KCNIP2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for KCNIP2-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNIP2-AS1 Gene

No ASD Table

Relevant External Links for KCNIP2-AS1 Gene

GeneLoc Exon Structure for
KCNIP2-AS1

Expression for KCNIP2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KCNIP2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KCNIP2-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x7.0), Heart - Left Ventricle (x6.1), Brain - Nucleus accumbens (basal ganglia) (x6.1), and Brain - Putamen (basal ganglia) (x4.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for KCNIP2-AS1

genes like me logo Genes that share expression patterns with KCNIP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNIP2-AS1 Gene

Orthologs for KCNIP2-AS1 Gene

Evolution for KCNIP2-AS1 Gene

ENSEMBL:
Gene Tree for KCNIP2-AS1 (if available)
TreeFam:
Gene Tree for KCNIP2-AS1 (if available)

No data available for Orthologs for KCNIP2-AS1 Gene

Paralogs for KCNIP2-AS1 Gene

No data available for Paralogs for KCNIP2-AS1 Gene

Variants for KCNIP2-AS1 Gene

Additional dbSNP identifiers (rs#s) for KCNIP2-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for KCNIP2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv951004 CNV deletion 24416366

Additional Variant Information for KCNIP2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNIP2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for KCNIP2-AS1 Gene

Disorders for KCNIP2-AS1 Gene

No disorders were found for KCNIP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNIP2-AS1 Gene

Publications for KCNIP2-AS1 Gene

No publications were found for KCNIP2-AS1 Gene.

Products for KCNIP2-AS1 Gene

Sources for KCNIP2-AS1 Gene