Aliases for KCNH7-AS1 Gene

Subcategory (RNA class) for KCNH7-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for KCNH7-AS1 Gene

  • KCNH7 Antisense RNA 1 2 3
  • Novel Transcript 5
  • HSALNG0020048 167
  • NONHSAG029694 92
  • AC011900.1 5
  • Lnc-GCA-2 168
  • KCNH7-AS1 2

External Ids for KCNH7-AS1 Gene

Summaries for KCNH7-AS1 Gene

GeneCards Summary for KCNH7-AS1 Gene

KCNH7-AS1 (KCNH7 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for KCNH7-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KCNH7-AS1 Gene

Genomics for KCNH7-AS1 Gene

GeneHancer (GH) Regulatory Elements for KCNH7-AS1 Gene

Promoters and enhancers for KCNH7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J162768 Promoter 0.6 Ensembl 500.7 +0.6 594 0.4 EP300 RFX1 BMI1 KCNH7-AS1 KCNH7
GH02J162769 Enhancer 0.2 Ensembl 500.7 +1.5 1494 0.2 KCNH7-AS1 KCNH7
GH02J162766 Enhancer 0.5 Ensembl 0.7 -2.0 -2006 0.4 RAD21 REST HNF4A NRF1 SP1 FOXA2 KCNH7-AS1 KCNH7 piR-31199-183
GH02J162838 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE CraniofacialAtlas 0.2 +70.2 70194 3.2 HDAC2 SMC3 MXI1 POLR2A ZNF335 REST SMARCA4 EZH2 RAD21 HSALNG0020049 KCNH7 KCNH7-AS1
GH02J162711 Enhancer 1 Ensembl ENCODE 0.2 -57.1 -57121 3 TCF7 CUX1 TGIF2 TEAD1 TBX3 ZSCAN9 FOXA2 CEBPB MAFF SAP130 KCNH7-AS1 piR-31199-183 KCNH7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KCNH7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KCNH7-AS1 Gene

Genomic Locations for KCNH7-AS1 Gene
chr2:162,768,407-162,797,973
(GRCh38/hg38)
Size:
29,567 bases
Orientation:
Plus strand
chr2:163,625,446-163,654,482
(GRCh37/hg19)
Size:
29,037 bases
Orientation:
Plus strand

Genomic View for KCNH7-AS1 Gene

Genes around KCNH7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNH7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNH7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNH7-AS1 Gene

Proteins for KCNH7-AS1 Gene

Post-translational modifications for KCNH7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNH7-AS1 Gene

Domains & Families for KCNH7-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KCNH7-AS1 Gene

Function for KCNH7-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNH7-AS1 Gene

Localization for KCNH7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCNH7-AS1 Gene

Pathways & Interactions for KCNH7-AS1 Gene

PathCards logo

SuperPathways for KCNH7-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for KCNH7-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KCNH7-AS1 Gene

Drugs & Compounds for KCNH7-AS1 Gene

No Compound Related Data Available

Transcripts for KCNH7-AS1 Gene

mRNA/cDNA for KCNH7-AS1 Gene

6 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
5 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNH7-AS1 Gene

No ASD Table

Relevant External Links for KCNH7-AS1 Gene

GeneLoc Exon Structure for
KCNH7-AS1

Expression for KCNH7-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for KCNH7-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNH7-AS1 Gene

Orthologs for KCNH7-AS1 Gene

Evolution for KCNH7-AS1 Gene

ENSEMBL:
Gene Tree for KCNH7-AS1 (if available)
TreeFam:
Gene Tree for KCNH7-AS1 (if available)

No data available for Orthologs for KCNH7-AS1 Gene

Paralogs for KCNH7-AS1 Gene

No data available for Paralogs for KCNH7-AS1 Gene

Variants for KCNH7-AS1 Gene

Additional dbSNP identifiers (rs#s) for KCNH7-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for KCNH7-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3309836 CNV mobile element insertion 20981092
esv3367914 CNV insertion 20981092

Additional Variant Information for KCNH7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNH7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for KCNH7-AS1 Gene

Disorders for KCNH7-AS1 Gene

No disorders were found for KCNH7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KCNH7-AS1 Gene

Publications for KCNH7-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for KCNH7-AS1 Gene

Products for KCNH7-AS1 Gene

Sources for KCNH7-AS1 Gene