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Aliases for KCND3-AS1 Gene

Subcategory (RNA class) for KCND3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCND3-AS1 Gene

  • KCND3 Antisense RNA 1 2 3 5
  • KCND3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for KCND3-AS1 Gene

Previous GeneCards Identifiers for KCND3-AS1 Gene

  • GC00U933167
  • GC01P112452

Summaries for KCND3-AS1 Gene

GeneCards Summary for KCND3-AS1 Gene

KCND3-AS1 (KCND3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KCND3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCND3-AS1 Gene

Genomics for KCND3-AS1 Gene

GeneHancer (GH) Regulatory Elements for KCND3-AS1 Gene

Promoters and enhancers for KCND3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I111878 Enhancer 0.9 ENCODE dbSUPER 11.4 -30.3 -30260 1.4 GTF2F1 ESRRA NEUROD1 KLF17 RFX5 CTBP1 HSF1 FOS MAZ RXRA KCND3-AS1 PIR54809 KCND3-IT1 KCND3
GH01I111880 Enhancer 0.7 ENCODE dbSUPER 11.5 -27.8 -27767 2.3 SREBF1 ZNF512B RXRA POLR2A SIN3A HNF4A KCND3-AS1 PIR54809 KCND3-IT1 KCND3
GH01I111947 Enhancer 0.6 ENCODE 11.6 +39.4 39386 1.7 HDGF SUZ12 NFIB KLF17 MAX GATAD2B ZIC2 SP1 POLR2A GLIS1 KCND3-AS1 KCND3 GC01P111956 PIR55386
GH01I111874 Enhancer 0.6 dbSUPER 11.1 -32.9 -32876 3.2 SREBF1 ATF4 ESRRA ZNF512B POLR2A HSF1 PAX8 CEBPG KCND3-AS1 KCND3-IT1 PIR54809 KCND3
GH01I112006 Enhancer 0.4 ENCODE 10.8 +97.9 97882 0.8 ZNF512B MTA1 LOC105378906 KCND3-AS1 GC01P112036
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KCND3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KCND3-AS1 Gene

Genomic Locations for KCND3-AS1 Gene
chr1:111,909,336-111,910,931
(GRCh38/hg38)
Size:
1,596 bases
Orientation:
Plus strand
chr1:112,451,958-112,453,553
(GRCh37/hg19)

Genomic View for KCND3-AS1 Gene

Genes around KCND3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCND3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCND3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCND3-AS1 Gene

Proteins for KCND3-AS1 Gene

Post-translational modifications for KCND3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCND3-AS1 Gene

Domains & Families for KCND3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCND3-AS1 Gene

Function for KCND3-AS1 Gene

Phenotypes From GWAS Catalog for KCND3-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCND3-AS1 Gene

Localization for KCND3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCND3-AS1 Gene

Pathways & Interactions for KCND3-AS1 Gene

SuperPathways for KCND3-AS1 Gene

No Data Available

Interacting Proteins for KCND3-AS1 Gene

Gene Ontology (GO) - Biological Process for KCND3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCND3-AS1 Gene

Drugs & Compounds for KCND3-AS1 Gene

No Compound Related Data Available

Transcripts for KCND3-AS1 Gene

mRNA/cDNA for KCND3-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KCND3-AS1 Gene

No ASD Table

Relevant External Links for KCND3-AS1 Gene

GeneLoc Exon Structure for
KCND3-AS1
ECgene alternative splicing isoforms for
KCND3-AS1

Expression for KCND3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCND3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KCND3-AS1 Gene

This gene is overexpressed in Testis (x40.1).
genes like me logo Genes that share expression patterns with KCND3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCND3-AS1 Gene

Orthologs for KCND3-AS1 Gene

Evolution for KCND3-AS1 Gene

ENSEMBL:
Gene Tree for KCND3-AS1 (if available)
TreeFam:
Gene Tree for KCND3-AS1 (if available)

No data available for Orthologs for KCND3-AS1 Gene

Paralogs for KCND3-AS1 Gene

No data available for Paralogs for KCND3-AS1 Gene

Variants for KCND3-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCND3-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000100702 -- 111,910,545(+) C/G intron_variant
rs1000408725 -- 111,910,308(+) G/A non_coding_transcript_variant
rs1001364678 -- 111,907,813(+) G/A upstream_transcript_variant
rs1002902922 -- 111,909,174(+) C/A upstream_transcript_variant
rs1002991752 -- 111,907,950(+) C/T upstream_transcript_variant

Additional Variant Information for KCND3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCND3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCND3-AS1 Gene

Disorders for KCND3-AS1 Gene

Additional Disease Information for KCND3-AS1

No disorders were found for KCND3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCND3-AS1 Gene

Publications for KCND3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for KCND3-AS1 Gene

Sources for KCND3-AS1 Gene

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