KATNBL1P3 Gene (Pseudogene)

Katanin Regulatory Subunit B1 Like 1 Pseudogene 3

GC18M002595
GIFtS:
5
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Aliases for KATNBL1P3 Gene

Aliases for KATNBL1P3 Gene

  • Katanin Regulatory Subunit B1 Like 1 Pseudogene 3 2 3 5
  • Katanin P80 Subunit B-Like 1 Pseudogene 3 2 3
  • KATNBL1P3 5

External Ids for KATNBL1P3 Gene

Summaries for KATNBL1P3 Gene

GeneCards Summary for KATNBL1P3 Gene

KATNBL1P3 (Katanin Regulatory Subunit B1 Like 1 Pseudogene 3) is a Pseudogene.

Additional gene information for KATNBL1P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KATNBL1P3 Gene

Genomics for KATNBL1P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for KATNBL1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J002592 Enhancer 0.7 Ensembl ENCODE 600.7 +1.6 1643 2.6 NFE2 CEBPB FOS ZNF316 JUN JUND FOSL1 EP300 FOSL2 NR2F1 KATNBL1P3 lnc-METTL4-3 METTL4 NDC80 SMCHD1
GH18J002597 Enhancer 0.5 Ensembl 0.7 -2.9 -2947 1.4 POLR2A CEBPG SPI1 SUPT5H POLR2B METTL4 KATNBL1P3 ENSG00000202224 NDC80 SMCHD1
GH18J002604 Enhancer 0.5 ENCODE 0.4 -10.9 -10898 3.5 REST ZSCAN4 SP1 FOXA2 ZBTB40 GABPA ELF1 CREM MLLT1 METTL4 NDC80 RNU6-340P KATNBL1P3 ENSG00000202224 SMCHD1
GH18J002617 Enhancer 0.3 Ensembl 0.4 -22.7 -22748 0.2 NFIC POLR2A RNU6-340P SMCHD1 ENSG00000202224 KATNBL1P3 NDC80
GH18J002602 Enhancer 0.2 Ensembl 0.4 -7.3 -7348 0.2 KATNBL1P3 ENSG00000202224 NDC80 SMCHD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KATNBL1P3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KATNBL1P3 Gene

Genomic Locations for KATNBL1P3 Gene
chr18:2,593,480-2,594,953
(GRCh38/hg38)
Size:
1,474 bases
Orientation:
Minus strand
chr18:2,593,673-2,594,912
(GRCh37/hg19)
Size:
1,240 bases
Orientation:
Minus strand

Genomic View for KATNBL1P3 Gene

Genes around KATNBL1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KATNBL1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KATNBL1P3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for KATNBL1P3 Gene

Proteins for KATNBL1P3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for KATNBL1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KATNBL1P3 Gene

Domains & Families for KATNBL1P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KATNBL1P3 Gene

Function for KATNBL1P3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KATNBL1P3 Gene

Localization for KATNBL1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KATNBL1P3 Gene

Pathways & Interactions for KATNBL1P3 Gene

PathCards logo

SuperPathways for KATNBL1P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KATNBL1P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KATNBL1P3 Gene

Drugs & Compounds for KATNBL1P3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for KATNBL1P3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for KATNBL1P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KATNBL1P3 Gene

No ASD Table

Relevant External Links for KATNBL1P3 Gene

GeneLoc Exon Structure for
KATNBL1P3

Expression for KATNBL1P3 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KATNBL1P3 Gene

mRNA expression in normal human tissues for KATNBL1P3 Gene
mRNA expression by GTEx for KATNBL1P3 Gene
genes like me logo Genes that share expression patterns with KATNBL1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KATNBL1P3 Gene

Orthologs for KATNBL1P3 Gene

Evolution for KATNBL1P3 Gene

ENSEMBL:
Gene Tree for KATNBL1P3 (if available)
TreeFam:
Gene Tree for KATNBL1P3 (if available)

No data available for Orthologs for KATNBL1P3 Gene

Paralogs for KATNBL1P3 Gene

No data available for Paralogs for KATNBL1P3 Gene

Variants for KATNBL1P3 Gene

Additional Variant Information for KATNBL1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KATNBL1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KATNBL1P3 Gene

Disorders for KATNBL1P3 Gene

No disorders were found for KATNBL1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KATNBL1P3 Gene

Publications for KATNBL1P3 Gene

No publications were found for KATNBL1P3 Gene.

No data available for Mastermind for KATNBL1P3 Gene

Products for KATNBL1P3 Gene

Sources for KATNBL1P3 Gene