Aliases for KATNBL1P3 Gene

Aliases for KATNBL1P3 Gene

  • Katanin Regulatory Subunit B1 Like 1 Pseudogene 3 2 3 5
  • Katanin P80 Subunit B-Like 1 Pseudogene 3 2 3

External Ids for KATNBL1P3 Gene

Summaries for KATNBL1P3 Gene

GeneCards Summary for KATNBL1P3 Gene

KATNBL1P3 (Katanin Regulatory Subunit B1 Like 1 Pseudogene 3) is a Pseudogene.

Additional gene information for KATNBL1P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KATNBL1P3 Gene

Genomics for KATNBL1P3 Gene

GeneHancer (GH) Regulatory Elements for KATNBL1P3 Gene

Promoters and enhancers for KATNBL1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J002592 Enhancer 0.7 Ensembl ENCODE 500.7 +1.6 1603 2.6 FOS ZNF316 FOSL2 CEBPB JUN NFE2 FOSL1 JUND NR2F1 EP300 KATNBL1P3 lnc-METTL4-3 METTL4 NDC80
GH18J002569 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +22.7 22712 5.2 ZBTB40 ZNF217 EP300 SIN3A NRF1 POLR2G GTF2E2 PHF8 JUND TEAD4 METTL4 NDC80 SMCHD1 MYL12B TGIF1 KATNBL1P3 lnc-METTL4-3
GH18J002597 Enhancer 0.4 Ensembl 0.7 -3.0 -2987 1.4 CEBPG SPI1 SUPT5H POLR2B POLR2A METTL4 KATNBL1P3 lnc-METTL4-3 ENSG00000202224 NDC80
GH18J002588 Enhancer 0.6 ENCODE 0.4 +5.1 5103 3 POLR2A ZKSCAN1 CEBPG FOS CEBPB ZNF335 EBF1 NFIL3 ZNF614 AGO1 RNU6-340P METTL4 KATNBL1P3 lnc-METTL4-3 NDC80
GH18J002604 Enhancer 0.6 ENCODE 0.4 -10.9 -10938 3.5 ZBTB40 FOXA2 GABPA IRF1 ELF1 CREM REST SP1 FOS ZSCAN4 METTL4 NDC80 RNU6-340P KATNBL1P3 lnc-METTL4-3 ENSG00000202224
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KATNBL1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KATNBL1P3 Gene

Genomic Locations for KATNBL1P3 Gene
chr18:2,593,674-2,594,913
(GRCh38/hg38)
Size:
1,240 bases
Orientation:
Minus strand
chr18:2,593,673-2,594,912
(GRCh37/hg19)
Size:
1,240 bases
Orientation:
Minus strand

Genomic View for KATNBL1P3 Gene

Genes around KATNBL1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KATNBL1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KATNBL1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KATNBL1P3 Gene

Proteins for KATNBL1P3 Gene

Post-translational modifications for KATNBL1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KATNBL1P3 Gene

Domains & Families for KATNBL1P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KATNBL1P3 Gene

Function for KATNBL1P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KATNBL1P3 Gene

Localization for KATNBL1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KATNBL1P3 Gene

Pathways & Interactions for KATNBL1P3 Gene

PathCards logo

SuperPathways for KATNBL1P3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for KATNBL1P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KATNBL1P3 Gene

Drugs & Compounds for KATNBL1P3 Gene

No Compound Related Data Available

Transcripts for KATNBL1P3 Gene

mRNA/cDNA for KATNBL1P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KATNBL1P3 Gene

No ASD Table

Relevant External Links for KATNBL1P3 Gene

GeneLoc Exon Structure for
KATNBL1P3

Expression for KATNBL1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KATNBL1P3 Gene

genes like me logo Genes that share expression patterns with KATNBL1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KATNBL1P3 Gene

Orthologs for KATNBL1P3 Gene

Evolution for KATNBL1P3 Gene

ENSEMBL:
Gene Tree for KATNBL1P3 (if available)
TreeFam:
Gene Tree for KATNBL1P3 (if available)

No data available for Orthologs for KATNBL1P3 Gene

Paralogs for KATNBL1P3 Gene

No data available for Paralogs for KATNBL1P3 Gene

Variants for KATNBL1P3 Gene

Additional Variant Information for KATNBL1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KATNBL1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KATNBL1P3 Gene

Disorders for KATNBL1P3 Gene

No disorders were found for KATNBL1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KATNBL1P3 Gene

Publications for KATNBL1P3 Gene

No publications were found for KATNBL1P3 Gene.

No data available for Mastermind for KATNBL1P3 Gene

Products for KATNBL1P3 Gene

Sources for KATNBL1P3 Gene