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Aliases for KARSP1 Gene

Aliases for KARSP1 Gene

  • Lysyl-TRNA Synthetase Pseudogene 1 2 3 5

External Ids for KARSP1 Gene

Previous GeneCards Identifiers for KARSP1 Gene

  • GC13P042500

Summaries for KARSP1 Gene

GeneCards Summary for KARSP1 Gene

KARSP1 (Lysyl-TRNA Synthetase Pseudogene 1) is a Pseudogene.

Additional gene information for KARSP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KARSP1 Gene

Genomics for KARSP1 Gene

GeneHancer (GH) Regulatory Elements for KARSP1 Gene

Promoters and enhancers for KARSP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I041915 Enhancer 1.1 Ensembl ENCODE 0.4 -8.5 -8548 2.2 ATF1 RB1 INSM2 MZF1 BMI1 FEZF1 BATF KLF5 IRF4 ZNF366 VWA8 KARSP1 RNU6-74P
GH13I041928 Enhancer 0.2 Ensembl 0.8 +3.1 3129 0.6 RNU6-74P VWA8 KARSP1 VWA8-AS1
GH13I041935 Enhancer 0.2 FANTOM5 0.4 +10.2 10201 0 VWA8 KARSP1 VWA8-AS1
GH13I041916 Enhancer 0.2 ENCODE 0.4 -10.2 -10243 0.5 VWA8 RNU6-74P KARSP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KARSP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KARSP1 Gene

Genomic Locations for KARSP1 Gene
1,954 bases
Plus strand

Genomic View for KARSP1 Gene

Genes around KARSP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KARSP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KARSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KARSP1 Gene

Proteins for KARSP1 Gene

Post-translational modifications for KARSP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KARSP1 Gene

Domains & Families for KARSP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KARSP1 Gene

Function for KARSP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KARSP1 Gene

Localization for KARSP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KARSP1 Gene

Pathways & Interactions for KARSP1 Gene

SuperPathways for KARSP1 Gene

No Data Available

Interacting Proteins for KARSP1 Gene

Gene Ontology (GO) - Biological Process for KARSP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KARSP1 Gene

Drugs & Compounds for KARSP1 Gene

No Compound Related Data Available

Transcripts for KARSP1 Gene

mRNA/cDNA for KARSP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KARSP1 Gene

No ASD Table

Relevant External Links for KARSP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KARSP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KARSP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of KARSP1 Gene:

genes like me logo Genes that share expression patterns with KARSP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KARSP1 Gene

Orthologs for KARSP1 Gene

Evolution for KARSP1 Gene

Gene Tree for KARSP1 (if available)
Gene Tree for KARSP1 (if available)

No data available for Orthologs for KARSP1 Gene

Paralogs for KARSP1 Gene

No data available for Paralogs for KARSP1 Gene

Variants for KARSP1 Gene

Additional Variant Information for KARSP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KARSP1 Gene

Disorders for KARSP1 Gene

No disorders were found for KARSP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KARSP1 Gene

Publications for KARSP1 Gene

No publications were found for KARSP1 Gene.

Products for KARSP1 Gene

Sources for KARSP1 Gene

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