Aliases for KARS1P2 Gene

Aliases for KARS1P2 Gene

  • Lysyl-TRNA Synthetase 1 Pseudogene 2 2 3 5
  • Lysyl-TRNA Synthetase Pseudogene 2 2 3
  • KARS1P2 5
  • KARSP2 3

External Ids for KARS1P2 Gene

Previous HGNC Symbols for KARS1P2 Gene

  • KARSP2

Summaries for KARS1P2 Gene

GeneCards Summary for KARS1P2 Gene

KARS1P2 (Lysyl-TRNA Synthetase 1 Pseudogene 2) is a Pseudogene.

Additional gene information for KARS1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for KARS1P2 Gene

Genomics for KARS1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for KARS1P2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J113130 Promoter 0.8 Ensembl CraniofacialAtlas 600.7 -0.1 -115 0.6 RBFOX2 ZBTB33 F10-AS1 KARS1P2 lnc-F7-2 piR-57137-012 F10 LOC102724474
GH13J113129 Promoter/Enhancer 0.6 Ensembl CraniofacialAtlas 600.7 -0.7 -672 0.3 RBFOX2 F10-AS1 KARS1P2 lnc-F7-2 piR-57137-012 F10 LOC102724474
GH13J113152 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas 11 +23.2 23235 3.5 GATAD2A PRDM10 ZNF629 REST TFE3 ZNF512 LEF1 ZIC2 RBFOX2 POLR2A LOC102724474 PCID2 TUBGCP3 KARS1P2 F10-AS1 F10 DCUN1D2-AS PROZ CUL4A ATP11A
GH13J113182 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 11 +55.8 55825 6.5 SP1 CREB1 GATAD2A ZNF629 TFE3 RFX1 IKZF1 NFKBIZ JUND ZIC2 PROZ PCID2 CUL4A F10-AS1 KARS1P2 F10 GRTP1 F7 LAMP1 ENSG00000269356
GH13J113021 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 -107.3 -107273 2.9 HNRNPL GATAD2A TFE3 SOX13 RCOR2 ZIC2 RBFOX2 PKNOX1 RXRB IRF2 MCF2L F7 MCF2L-AS1 F10 F10-AS1 KARS1P2 PROZ LOC107984590 lnc-F7-6 MN298678-022
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around KARS1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for KARS1P2 Gene

Genomic Locations for KARS1P2 Gene
1,639 bases
Plus strand
1,639 bases
Plus strand

Genomic View for KARS1P2 Gene

Genes around KARS1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KARS1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KARS1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KARS1P2 Gene

Proteins for KARS1P2 Gene

Post-translational modifications for KARS1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KARS1P2 Gene

Domains & Families for KARS1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for KARS1P2 Gene

Function for KARS1P2 Gene

Phenotypes From GWAS Catalog for KARS1P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KARS1P2 Gene

Localization for KARS1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KARS1P2 Gene

Pathways & Interactions for KARS1P2 Gene

PathCards logo

SuperPathways for KARS1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for KARS1P2 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for KARS1P2 Gene

Drugs & Compounds for KARS1P2 Gene

No Compound Related Data Available

Transcripts for KARS1P2 Gene

mRNA/cDNA for KARS1P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for KARS1P2 Gene

No ASD Table

Relevant External Links for KARS1P2 Gene

GeneLoc Exon Structure for

Expression for KARS1P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KARS1P2 Gene

Orthologs for KARS1P2 Gene

Evolution for KARS1P2 Gene

Gene Tree for KARS1P2 (if available)
Gene Tree for KARS1P2 (if available)

No data available for Orthologs for KARS1P2 Gene

Paralogs for KARS1P2 Gene

No data available for Paralogs for KARS1P2 Gene

Variants for KARS1P2 Gene

Additional Variant Information for KARS1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KARS1P2 Gene

Disorders for KARS1P2 Gene

No disorders were found for KARS1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KARS1P2 Gene

Publications for KARS1P2 Gene

No publications were found for KARS1P2 Gene.

No data available for Mastermind for KARS1P2 Gene

Products for KARS1P2 Gene

Sources for KARS1P2 Gene