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Aliases for JAZF1-AS1 Gene

Subcategory (RNA class) for JAZF1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for JAZF1-AS1 Gene

  • JAZF1 Antisense RNA 1 2 3 5
  • JAZF1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for JAZF1-AS1 Gene

Previous GeneCards Identifiers for JAZF1-AS1 Gene

  • GC07P028220

Summaries for JAZF1-AS1 Gene

GeneCards Summary for JAZF1-AS1 Gene

JAZF1-AS1 (JAZF1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for JAZF1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JAZF1-AS1 Gene

Genomics for JAZF1-AS1 Gene

GeneHancer (GH) Regulatory Elements for JAZF1-AS1 Gene

Promoters and enhancers for JAZF1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I028178 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 568.5 -0.3 -271 2.7 MXI1 SIN3A BATF ZIC2 IRF4 ZNF335 GLIS2 ZBTB48 POLR2A VEZF1 JAZF1-AS1 JAZF1 GC07M028118 RNU6-979P
GH07I028182 Enhancer 0.6 FANTOM5 Ensembl dbSUPER 550.8 +1.9 1927 0.3 JAZF1 JAZF1-AS1 PPIAP80
GH07I028149 Enhancer 0.8 ENCODE dbSUPER 27 -30.2 -30156 1.5 RXRA NR2F1 MAX EBF1 JUND BCL11A IKZF1 HNF4A IKZF2 RUNX3 JAZF1-AS1 JAZF1 GC07M028118 RNU6-979P
GH07I028203 Enhancer 0.7 FANTOM5 ENCODE 29.2 +23.8 23786 0.8 TEAD4 CBFA2T3 ZNF507 JAZF1-AS1 JAZF1 PPIAP80
GH07I028154 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -24.4 -24425 3.4 PKNOX1 FOXA2 BMI1 BATF KLF5 IRF4 RAD21 ZBTB40 RFX5 YY1 JAZF1 JAZF1-AS1 GC07M028118 RNU6-979P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around JAZF1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for JAZF1-AS1 Gene

Genomic Locations for JAZF1-AS1 Gene
63,596 bases
Plus strand

Genomic View for JAZF1-AS1 Gene

Genes around JAZF1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
JAZF1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for JAZF1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JAZF1-AS1 Gene

Proteins for JAZF1-AS1 Gene

Post-translational modifications for JAZF1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for JAZF1-AS1 Gene

Domains & Families for JAZF1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for JAZF1-AS1 Gene

Function for JAZF1-AS1 Gene

Phenotypes From GWAS Catalog for JAZF1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for JAZF1-AS1 Gene

Localization for JAZF1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for JAZF1-AS1 Gene

Pathways & Interactions for JAZF1-AS1 Gene

SuperPathways for JAZF1-AS1 Gene

No Data Available

Interacting Proteins for JAZF1-AS1 Gene

Gene Ontology (GO) - Biological Process for JAZF1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for JAZF1-AS1 Gene

Drugs & Compounds for JAZF1-AS1 Gene

No Compound Related Data Available

Transcripts for JAZF1-AS1 Gene

mRNA/cDNA for JAZF1-AS1 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for JAZF1-AS1 Gene

JAZF1 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for JAZF1-AS1 Gene

No ASD Table

Relevant External Links for JAZF1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for JAZF1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for JAZF1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for JAZF1-AS1 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x5.3), Brain - Cortex (x4.4), and Brain - Cerebellar Hemisphere (x4.2).

SOURCE GeneReport for Unigene cluster for JAZF1-AS1 Gene:

genes like me logo Genes that share expression patterns with JAZF1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for JAZF1-AS1 Gene

Orthologs for JAZF1-AS1 Gene

Evolution for JAZF1-AS1 Gene

Gene Tree for JAZF1-AS1 (if available)
Gene Tree for JAZF1-AS1 (if available)

No data available for Orthologs for JAZF1-AS1 Gene

Paralogs for JAZF1-AS1 Gene

No data available for Paralogs for JAZF1-AS1 Gene

Variants for JAZF1-AS1 Gene

Sequence variations from dbSNP and Humsavar for JAZF1-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000075355 -- 28,190,743(+) T/A intron_variant
rs1000075641 -- 28,232,608(+) C/A intron_variant
rs1000258178 -- 28,218,824(+) A/G intron_variant
rs1000272137 -- 28,207,110(+) T/C intron_variant
rs1000334186 -- 28,219,752(+) A/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for JAZF1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1032041 CNV gain 25217958
nsv1074083 CNV deletion 25765185
nsv1137575 CNV deletion 24896259
nsv1140757 CNV deletion 24896259
nsv830931 CNV gain 17160897
nsv950820 CNV deletion 24416366

Additional Variant Information for JAZF1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for JAZF1-AS1 Gene

Disorders for JAZF1-AS1 Gene

Additional Disease Information for JAZF1-AS1

No disorders were found for JAZF1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for JAZF1-AS1 Gene

Publications for JAZF1-AS1 Gene

  1. A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci. (PMID: 21980299) Bradfield JP … Hakonarson H (PLoS genetics 2011) 3 58
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 58

Products for JAZF1-AS1 Gene

Sources for JAZF1-AS1 Gene

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