Aliases for ISCA1P6 Gene

Aliases for ISCA1P6 Gene

  • Iron-Sulfur Cluster Assembly 1 Pseudogene 6 2 3 5
  • Iron-Sulfur Cluster Assembly 1 Homolog (S. Cerevisiae) Pseudogene 6 2
  • Iron-Sulfur Cluster Assembly 1 Homolog Pseudogene 6 3
  • ISCA1P6 5

External Ids for ISCA1P6 Gene

Previous GeneCards Identifiers for ISCA1P6 Gene

  • GC02M129274
  • GC02M121578

Summaries for ISCA1P6 Gene

GeneCards Summary for ISCA1P6 Gene

ISCA1P6 (Iron-Sulfur Cluster Assembly 1 Pseudogene 6) is a Pseudogene.

Additional gene information for ISCA1P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ISCA1P6 Gene

Genomics for ISCA1P6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ISCA1P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J128519 Promoter 0.3 Ensembl 250.7 +0.2 156 0.2 ISCA1P6 piR-57934-001 HS6ST1 LOC105373611 HSALNG0018681-002 HSALNG0018681-001
GH02J128520 Enhancer 0.8 Ensembl ENCODE 0.7 -2.0 -2043 3 BCLAF1 BCL11A IRF4 EBF1 BHLHE40 BATF IKZF1 NR2F1 JUNB TCF12 HS6ST1 ISCA1P6 RF00017-2986 LOC105373611 HSALNG0018681-002 HSALNG0018681-001
GH02J128523 Enhancer 0.3 Ensembl 0.7 -4.3 -4344 0.8 PKNOX1 RFX1 ISCA1P6 RF00017-2986 LOC105373611 HSALNG0018681-002 HS6ST1 HSALNG0018681-001
GH02J128528 Enhancer 0.5 Ensembl 0.4 -9.0 -9044 1 ATF2 CREB1 ZSCAN4 ATF1 ATF7 HS6ST1 ISCA1P6 RF00017-2986 LOC105373611 HSALNG0018681-002 HSALNG0018681-001
GH02J128526 Enhancer 0.4 Ensembl 0.4 -7.1 -7144 1.6 ZIC2 MYC MAX GLIS1 HS6ST1 ISCA1P6 RF00017-2986 LOC105373611 HSALNG0018681-002 HSALNG0018681-001
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ISCA1P6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ISCA1P6 Gene

Latest Assembly
chr2:128,517,289-128,519,257
(GRCh38/hg38)
Size:
1,969 bases
Orientation:
Minus strand

Previous Assembly
chr2:129,274,863-129,276,831
(GRCh37/hg19 by Entrez Gene)
Size:
1,969 bases
Orientation:
Minus strand

chr2:129,276,362-129,276,751
(GRCh37/hg19 by Ensembl)
Size:
390 bases
Orientation:
Minus strand

Genomic View for ISCA1P6 Gene

Genes around ISCA1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ISCA1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ISCA1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ISCA1P6 Gene

Proteins for ISCA1P6 Gene

Post-translational modifications for ISCA1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ISCA1P6 Gene

Domains & Families for ISCA1P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ISCA1P6 Gene

Function for ISCA1P6 Gene

Phenotypes From GWAS Catalog for ISCA1P6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ISCA1P6 Gene

Localization for ISCA1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ISCA1P6 Gene

Pathways & Interactions for ISCA1P6 Gene

PathCards logo

SuperPathways for ISCA1P6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ISCA1P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ISCA1P6 Gene

Drugs & Compounds for ISCA1P6 Gene

No Compound Related Data Available

Transcripts for ISCA1P6 Gene

mRNA/cDNA for ISCA1P6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ISCA1P6 Gene

No ASD Table

Relevant External Links for ISCA1P6 Gene

GeneLoc Exon Structure for
ISCA1P6

Expression for ISCA1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ISCA1P6 Gene

genes like me logo Genes that share expression patterns with ISCA1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ISCA1P6 Gene

Orthologs for ISCA1P6 Gene

Evolution for ISCA1P6 Gene

ENSEMBL:
Gene Tree for ISCA1P6 (if available)
TreeFam:
Gene Tree for ISCA1P6 (if available)
Alliance of Genome Resources:
Additional Orthologs for ISCA1P6

No data available for Orthologs for ISCA1P6 Gene

Paralogs for ISCA1P6 Gene

No data available for Paralogs for ISCA1P6 Gene

Variants for ISCA1P6 Gene

Additional Variant Information for ISCA1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ISCA1P6
Leiden Open Variation Database (LOVD)
ISCA1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ISCA1P6 Gene

Disorders for ISCA1P6 Gene

No disorders were found for ISCA1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ISCA1P6 Gene

Publications for ISCA1P6 Gene

  1. Genome-wide association study of smoking behaviours in patients with COPD. (PMID: 21685187) Siedlinski M … ECLIPSE Investigators (Thorax 2011) 40
  2. A genetic variant near the PMAIP1/Noxa gene is associated with increased bleomycin sensitivity. (PMID: 21106707) Gu J … Wu X (Human molecular genetics 2011) 40
  3. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 40
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 40
  5. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 40

No data available for Mastermind for ISCA1P6 Gene

Products for ISCA1P6 Gene

Sources for ISCA1P6 Gene